Table 2. Non-synonymous polymorphisms in Gzm genes linked to GzmB on Chr 14 1.
Gene | Polymorphism3 |
GzmC | L7I4 |
E175K (rs266005675) 2 | |
GzmF | I4V (rs49622871)2 , 4 |
GzmN | None |
GzmG | G51R |
S144T (rs244881887) 2 | |
GzmD | I4V4 |
W247R (rs16803648) 2 | |
GzmE | None |
Genes are listed in their correct order on Chr 14, not alphabetically.
Previously recorded in various SNP databases.
Most of the predicted amino acid changes are highly conservative; unlike GzmB, none are predicted to affect the substrate cleft.
Map to the leader sequence, so do not affect the mature protein; a total of four polymorphisms affecting mature protein are shown in bold.