Table 1.
A subset of candidate genes involved in the immune response to lipopolysaccharide (LPS) challenge. Values at three time points indicate the fold changes relative to the control.
| Gene Name | Transcript ID | 4 h | 24 h | 72 h |
|---|---|---|---|---|
| Pathogen Recognition | ||||
| CD36-like protein | CL21862.Contig1_haishen | −11.13 | 1.47 | −1.44 |
| Cytosol-type hsp70 | CL15292.Contig1_haishen | 1.53 | 20.97 | 3.39 |
| Fucolectin-7-like | CL7223.Contig2_haishen | 13.45 | −8.63 | −4.76 |
| Fibrinogen-like protein | CL220.Contig10_haishen | 2.58 | 1.70 | 2.32 |
| Heat shock protein 90 | Unigene44996_haishen | 2.93 | 4.49 | 6.18 |
| Lipopolysaccharide-binding protein | CL17187.Contig3_haishen | 1.79 | −1.99 | −2.75 |
| Mannan-binding C-type lectin | CL3438.Contig1_haishen | 1.16 | −1.23 | −2.35 |
| Scavenger receptor cysteine-rich protein type 12 precursor | CL14054.Contig1_haishen | 22.16 | 39.40 | 6.02 |
| Toll-like receptor | CL791.Contig3_haishen | −1.21 | 2.97 | 1.37 |
| Toll-like receptor 3 | CL4619.Contig1_haishen | 1.44 | 1.73 | 1.48 |
| Reorganization of Cytoskeleton | ||||
| Actin | Unigene6143_haishen | 1.92 | −1.19 | −1.67 |
| Amassin 2 precursor | Unigene33380_haishen | −12.73 | −2.31 | −5.90 |
| Amassin 4 precursor | Unigene32576_haishen | −5.62 | −2.50 | −3.51 |
| Focal adhesion kinase | CL4773.Contig4_haishen | −1.30 | −6.11 | 1.27 |
| Myosin V | CL15948.Contig2_haishen | −2.04 | −3.73 | −11.79 |
| Inflammation | ||||
| Complement component 3 | CL9805.Contig1_haishen | −1.61 | 1.31 | 1.09 |
| Complement component 3-2 | Unigene40467_haishen | −1.97 | 1.19 | 10.33 |
| Complement factor B | CL3046.Contig1_haishen | 1.18 | 1.14 | 1.23 |
| Complement factor B-2 | CL3046.Contig2_haishen | −1.41 | 1.51 | 1.26 |
| Complement factor H-like | CL339.Contig6_haishen | 1.00 | 1.17 | 1.31 |
| LPS-induced TNF-α factor | Unigene174_haishen | −1.12 | 1.23 | 1.23 |
| Myeloid differentiation primary response gene 88 | Unigene40451_haishen | 1.18 | 1.11 | 1.32 |
| NF-κB transcription factor Rel | CL9343.Contig1_haishen | 1.32 | 1.39 | 1.30 |
| TBK1- like | CL13483.Contig1_haishen | 1.05 | 1.18 | −1.04 |
| TNF receptor-associated factor 3 | CL13373.Contig2_haishen | −1.13 | 1.83 | −1.07 |
| TNF receptor-associated factor 6 | CL11554.Contig2_haishen | 1.49 | 1.56 | 1.12 |
| Thymosin β | CL4869.Contig1_haishen | −5.82 | −3.32 | −1.32 |
| Apoptosis | ||||
| Caspase 6 | CL16102.Contig1_haishen | 2.53 | 6.15 | 19.29 |
| Caspase 8 | CL18389.Contig1_haishen | −1.06 | 1.28 | 1.16 |
| Cathepsin B | Unigene3030_haishen | 8.86 | 7.67 | 9.38 |
| Lysozyme | Unigene8800_haishen | 5.13 | 3.56 | 1.85 |
CD36, Cluster of differentiation 36; LPS, lipopolysaccharide; TNF, tumor necrosis factor; NF-κB, nuclear factor-κ-B.