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. 2014 Nov 6;15(11):20321–20338. doi: 10.3390/ijms151120321

Table 1.

DNA torsion angles.

Segment Definition Torsion Angle (°)
64M-2 Fab dT(6-4)T a dT(6-4)T a B-DNA b
(6-4) Linkage c N1−C6−C4#−C5# −139
N1−C6−C4#−N3# 39 27
(C5 methyl)−C5−C6−C4# −164 −163
5'-T
Glycosidic linkage χ (O4'−C1'−N1−C2) −135 −138 −117
Backbone γ (O5'−C5'−C4'−C3') 103 56 54
δ (C5'−C4'−C3'−O3') 85 80 123
ε (C4'−C3'−O3'−P) −110 −107 −169
ζ (C3'−O3'−P−O5') −84 −76 −108
3'-T
Glycosidic linkage χ (O4'−C1'−N1−C2) −71 −75 −117
Backbone α (O3'−P−O5'−C5') −71 −96 −63
β (P−O5−C5'−C4') −172 −177 171
γ (O5'−C5'−C4'−C3') 35 43 54
δ (C5'−C4'−C3'−O3') 120 100 123

a The torsion angles of dT(6-4)T are shown for the 64M-2 Fab—dT(6-4)T complex [11] and isolated dT(6-4)T in solution [34]; b The mean torsion angles of double-stranded B-DNA, the so-called Drew-Dickerson dodecamer [37], are also shown as a reference; and c The atoms of 3'-T are marked with #.