Table 1.
Segment | Definition | Torsion Angle (°) | ||
---|---|---|---|---|
64M-2 Fab dT(6-4)T a | dT(6-4)T a | B-DNA b | ||
(6-4) Linkage c | N1−C6−C4#−C5# | −139 | − | |
N1−C6−C4#−N3# | 39 | 27 | ||
(C5 methyl)−C5−C6−C4# | −164 | −163 | ||
5'-T | ||||
Glycosidic linkage | χ (O4'−C1'−N1−C2) | −135 | −138 | −117 |
Backbone | γ (O5'−C5'−C4'−C3') | 103 | 56 | 54 |
δ (C5'−C4'−C3'−O3') | 85 | 80 | 123 | |
ε (C4'−C3'−O3'−P) | −110 | −107 | −169 | |
ζ (C3'−O3'−P−O5') | −84 | −76 | −108 | |
3'-T | ||||
Glycosidic linkage | χ (O4'−C1'−N1−C2) | −71 | −75 | −117 |
Backbone | α (O3'−P−O5'−C5') | −71 | −96 | −63 |
β (P−O5−C5'−C4') | −172 | −177 | 171 | |
γ (O5'−C5'−C4'−C3') | 35 | 43 | 54 | |
δ (C5'−C4'−C3'−O3') | 120 | 100 | 123 |