Telomere shortening |
+ (Bodnar et al., 1998; Harley et al., 1990) |
− (Evans et al., 2003) |
|
− (Cherif et al., 2003) |
Inconclusive (Eitan et al., 2014) |
Inconclusive (Eitan et al., 2014) |
β-galactosidase |
+ (Dimri et al., 1995) |
+ (Bhat et al., 2012; Bitto et al., 2010; Evans et al., 2003) |
+ (Jurk et al., 2012) (Squillaro et al., 2012) (neuroblastoma) (Wan et al., 2014)(PC12) |
+ (Geng et al., 2010) |
+ (Tiribuzi et al., 2011) |
+ (van Dijk et al., 2013) (CSF) |
Lipofuscin |
+ (Sitte et al., 2001; Vogt et al., 1998) |
+ (Kim et al., 2002) |
+ (Panossian et al., 2011) |
+ (Kim et al., 2002; Oenzil et al., 1994) |
+ (Hirai et al., 2001) |
+ (Braak et al., 2003) |
Morphological changes |
↑ cytoplasm/nucleus, flat (Wang and Gundersen, 1984) |
Enlarged cell body, flat (Yamada et al., 2008) |
↑ cytoplasm/nucleus (Ledda et al., 2000; Peinado et al., 1993)
Dendritic atrophy and regression (Rafols et al., 1989)
↓ myelination (Peters et al., 2000) |
|
Dendritic spine defects (Zhao et al., 2006) |
|
Nuclear disorganization |
↓ Lamin B (Freund et al., 2012; Shimi et al., 2011) |
↑ Size, nuclear bodies, nucleolar disorganization (Berciano et al., 1995) |
No change (Lesuisse and Martin, 2002)
↑ nuclear area/IOD (Rodrigues et al., 2014) |
|
|
|
Cell cycle regulating genes |
p53 (Kulju and Lehman, 1995)
p16(INK4a) (Alcorta et al., 1996)
p21WAF1 (Alcorta et al., 1996; Noda et al., 1994)
E2F-1 loss (Dimri et al., 1994)
Activated Rb (Narita et al., 2003) |
p53, p21WAF1 (Bitto et al., 2010; Evans et al., 2003)
p16(INK4a) (Bitto et al., 2010) (Bhat et al., 2012) (both in vivo and in vitro) |
p16(INK4a), p21, pRb (Wan et al., 2014) |
p16(INK4a) (Bhat et al., 2012) |
p16(INK4a) (Bhat et al., 2012; Luth et al., 2000; McShea et al., 1997)
p21RAS (Luth et al., 2000)
↑ CDK4 (McShea et al., 1997)
Hyper-P Rb (inactive) (Ranganathan et al., 2001)
PAK3 inh. (McPhie et al., 2003) |
Hyper-P Rb (inacitve) (Jordan-Sciutto et al., 2003) |
p38MAPK |
+ (Freund et al., 2011; Iwasa et al., 2003) |
+ (Bhat et al., 2012) |
+ (Jurk et al., 2012) |
− (Sun et al., 2003) |
+ (Pei et al., 2001; Savage et al., 2002; Sun et al., 2003) |
|
SASP |
IL-6, IL-8, MMP-3 (Rodier et al., 2009)
NF B (Freund et al., 2011) |
IL-6, MMP-1 (Bhat et al., 2012)
IL-1β (Yu et al., 2002) |
IL-6 (Jurk et al., 2012) |
MMP-1 (Bhat et al., 2012) |
IL-6 (Bauer et al., 1991a; Blum-Degen et al., 1995; Huell et al., 1995; Luterman et al., 2000; Wood et al., 1993)
IL-1β (CSF) (Blum-Degen et al., 1995)
TGF-β (Luterman et al., 2000)
MMP-1 (Bhat et al., 2012) |
IL-6, IL-1β (Blum-Degen et al., 1995) (CSF) |
SAHF |
+ (Bitto et al., 2010; Narita et al., 2003) |
+ (Bitto et al., 2010) |
|
|
|
|
Retrotransposons |
↑ Alu, SVA, L1 (De Cecco et al., 2013) |
|
|
↑ R1, R2, gypsy (Li et al., 2013) |
|
|
DNA methylation |
Global hypomethylation, ↓ DNMT1, ↑MBD2 (Zhang et al., 2008) |
|
|
|
↓ DNMT1, MBD2 (Mastroeni et al., 2010) |
|
Histone modifications |
SIRT6, H3K9 (Michishita et al., 2008)
H3K9me3, H3K27me3 (Chandra et al., 2012) |
|
γH2AX (Jurk et al., 2012) (Wan et al., 2014) (PC12)
↓ SIRT1 (Panossian et al., 2011)
↓ heterochromatic areas, ↓ H3K9me3, ↑ H3K9Ac (Rodrigues et al., 2014) |
|
↓ euchromatin fraction (Crapper et al., 1979) |
|
Autophagy-lysosomal dysfunction |
↓ Atg7, Atg12, Lamp2 (Kang et al., 2011) |
|
|
↓ autophagy (Lipinski et al., 2010) |
↑ autophagy, ↓ lysosomal degradation (Lipinski et al., 2010)
↓ membrane impermeability (Yang et al., 1998)
↑ autopha-gosomes (Lee et al., 2010) |
↓ LAMP1, Cathepsin D, HSP73 (Chu et al., 2009)
↓ Cathepsin E ↑ α-fucosidase (van Dijk et al., 2013) (CSF) |
Mitochondrial dysfunction |
↑ MtDNA damage (Chen et al., 1995) |
↑ ROS production (Pertusa et al., 2007)
↓MMP (Lin et al., 2007) |
↑ ROS production (Jurk et al., 2012) (Wan et al., 2014) (PC12, SH-SY5Y))
↑ mitochondrial size (Martinelli et al., 2006) |
↑ MtDNA (Mecocci et al., 1993)
↓ α-subunit F1 ATP synthase (Lu et al., 2004) |
↑ MtDNA damage, Enlarged morphology, ↓MMP (Trimmer et al., 2000)
↑ ROS production, ↓ Complex IV activity (Sheehan et al., 1997a)
↓ Drp1, OPA1, Mfn1, Mfn2 ↑ Fis1 (Wang et al., 2009) |
↑ MtDNA Damage, Enlarged morphology, ↓MMP (Trimmer et al., 2000)
↓ Complex I activity (Sheehan et al., 1997b)
Mut DJ-1, PINK1, Parkin1 (Bonifati, 2014) |