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. 2014 Dec 12;9(12):e115201. doi: 10.1371/journal.pone.0115201

Figure 4. Phylogram of plant cryptochromes.

Figure 4

CRY amino acid sequences from 14 diverse plant species were obtained from the NCBI database. The alignment was constructed using ClustalX and the phylogenetic tree was constructed using the neighbor-joining method of MEGA version 4.1 software. Each node corresponds to a number indicating the bootstrap value for 1000 replicates. The scale bar represents 0.05 substitutions per sequence position. PeCRY1 is denoted by a red dot. At, Arabidopsis thaliana; Bj, Brassica juncea; Bn, Brassica napus; Gm, Glycine max; Ps, Pisum sativum; Ms, Medicago sativa; Pt, Populus tremula; Pe, Populus euphratica; Vv, Vitis vinifera; Vr, Vitis riparia; Fv, Fragaria vesca; Md, Malus domestica; Om, Orobanche minor; Sl, Solanum lycopersicum; Cb, Chrysanthemum boreale; Ta, Triticum aestivum; Zm, Zea mays; Os, Oryza sativa.