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. 2014 Sep 25;64(1):112–126. doi: 10.1093/sysbio/syu080

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© The Author(s) 2014. Published by Oxford University Press, on behalf of the Society of Systematic Biologists.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 5. — Impact of repeat type on tree resolution and method performance. Informativeness of each repeat type was estimated by creating subsets of the original matrices based on repeat annotation; in each case the mean bootstrap was calculated for each repeat type and each taxon dataset, error bars represent the standard error. a) DNA transposons. b) Ty1/Copia LTR retrotransposons. c) Ty3/Gypsy LTR retrotransposons. d) rDNA. e) Satellites. f) Other repeats including unclassified repeats and nonLTR retrotransposons.