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. 2014 Nov 30;14:235. doi: 10.1186/s12862-014-0235-7

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© Medlar et al.; licensee BioMed Central Ltd. 2014

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Séance workflow overview. Overview of the complete Séance workflow. Input files can be either raw SFF files from Roche/454 or FASTQ files from other platforms. The clustering command outputs a BIOM file and cluster centroids in a FASTA file. The phylogenetic placement command outputs a phylogeny and a phylogenetically consistent multiple sequence alignment.