Table 1. Characteristics of selected C19MC microRNAs.
Assay name | miRBase ID | NCBI Location Chromosome | microRNA sequence | Expression in placenta |
hsa-miR-516-5p | hsa-miR-516b-5p | Chr.19: 58920508 - 58920592 [+] | 5′-CAUCUGGAGGUAAGAAGCACUUU-3′ | exclusively expressed |
hsa-miR-517* | hsa-miR-517-5p | Chr.19: 54215522 - 54215608 [+] | 5′-CCUCUAGAUGGAAGCACUGUCU-3′ | high expression |
hsa-miR-518b | hsa-miR-518b | Chr.19: 54205991 - 54206073 [+] | 5′-CAAAGCGCUCCCCUUUAGAGGU-3′ | exclusively expressed |
hsa-miR-520a* | hsa-miR-520a-5p | Chr.19: 54194135 - 54194219 [+] | 5′-CUCCAGAGGGAAGUACUUUCU-3′ | high expression |
hsa-miR-520h | hsa-miR-520h | Chr.19: 54245766 - 54245853 [+] | 5′-ACAAAGUGCUUCCCUUUAGAGU-3′ | exclusively expressed |
hsa-miR-525 | hsa-miR-525-5p | Chr.19: 54200787 - 54200871 [+] | 5′-CUCCAGAGGGAUGCACUUUCU-3′ | exclusively expressed |
hsa-miR-526a | hsa-miR-526a | Chr.19: 54209506 - 54209590 [+] | 5′-CUCUAGAGGGAAGCACUUUCU-3′ | high expression |
C19MC microRNAs were divided into two categories (microRNAs exclusively expressed in the placental tissue and those with high expression in the placental tissue) based on information in miRNAMap 2.0 database (http://mirnamap.mbc.nctu.edu.tw/index.php), where the Q-PCR experiments for monitoring the expression profiles of 224 human miRNAs in eighteen major normal tissues in humans are provided. For example, we indicated miR-516-5p and miR-518b as those to be exclusively expressed in the placental tissue, since according to the miRNAMap 2.0 database miR-516-5p was shown to be expressed only in the placental tissue and miR-518b to be highly expressed in the placental tissue and rarely expressed in testes. On the other hand, for instance miR-520a* showed besides high expression in the placental tissue also low expression in other human tissues involving adipose, bladder, brain, cervix, heart, kidney, liver, lung, muscle, ovary, prostate, small intestine, spleen, testes, thymus, thyroid and trachea.