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. 2014 Dec 3;14:337. doi: 10.1186/s12870-014-0337-9

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© Ruggieri et al.; licensee BioMed Central Ltd. 2014

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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LD Blocks for chromosomes where associated markers were localized. Blocks of markers that are in strong LD using confidence intervals algorithm in Haploview software (black triangle) are reported. The size of blocks (in kbp) in which significantly associated markers fall (green lines) is shown. The colour scheme (D’/LOD) used to represent pairwise LD estimate ranges from bright red (LOD ≥2 and D’ = 1) to white ( LOD <2 and D’ <1).