Table 5.
The alkanes degradation and rhamnolipids biosynthesis related genes identified in genome of D. maris AS-13-3.
| Gene name | Functional description | Organism | Identity | GenBank ID |
|---|---|---|---|---|
| alkB | AlkB-Rd fusion protein | Dietzia cinnamea P4 | 100% | KP202090 |
| tetR | TetR family transcriptional regulator | Dietzia sp. E1 | 95% | KP202073 |
| fd | Ferredoxin reductase | Dietzia cinnamea P4 | 100% | KP202087 |
| cyp153 | Cytochrome P450 153A16 | Dietzia cinnamea P4 | 99% | KP202088 |
| fdR | 2Fe-2S ferredoxin | Dietzia cinnamea P4 | 100% | KP202089 |
| acdH | Alcohol dehydrogenase | Dietzia cinnamea P4 | 96% | KP202082 |
| addH | Aldehyde dehydrogenase | Dietzia cinnamea P4 | 94% | KP202081 |
| acS | Acyl-CoA synthetase | Dietzia cinnamea P4 | 91% | KP202084 |
| algC | Phosphomannomutase | Dietzia cinnamea P4 | 85.65% | KP202070 |
| rmlC | dTDP-4-dehydrorhamnose 3,5-epimerase | Dietzia cinnamea P4 | 97% | KP202076 |
| rmlA | Glucose-1-phosphate thymidylyltransferase | Dietzia cinnamea P4 | 62% | KP202079 |
| rmlB | dTDP-glucose 4,6-dehydratase | Dietzia cinnamea P4 | 95% | KP202080 |
| rmlD | dTDP-4-dehydrorhamnose reductase | Rhodococcus equi ATCC 33707 | 92% | KP202078 |
| accD1 | Acetyl-CoA carboxylase | Dietzia cinnamea P4 | 97% | KP202072 |
| accD2 | Acetyl-CoA carboxylase | Rhodococcus opacus PD630 | 77% | KP202086 |
| accA1 | Acyl-CoA carboxylase alpha chain | Dietzia cinnamea P4 | 94% | KP202085 |
| accB | Acyl-CoA carboxylase beta chain | Dietzia cinnamea P4 | 97% | KP202074 |
| accA2 | Acyl-CoA carboxylase alpha chain | Dietzia cinnamea P4 | 98% | KP202075 |
| fabD | ACP-S-malonyltransferase | Dietzia cinnamea P4 | 95% | KP202083 |
| fabB | Beta-ketoacyl-ACP synthase I | Dietzia cinnamea P4 | 89% | KP202067 |
| fabG1 | 3-Ketoacyl-ACP reductase | Dietzia cinnamea P4 | 98% | KP202068 |
| fabG2 | 3-Ketoacyl-ACP reductase | Dietzia cinnamea P4 | 98% | KP202069 |
| fabG3 | 3-Ketoacyl-ACP reductase | Dietzia cinnamea P4 | 97% | KP202077 |
| rhlA | 3-(3-Hydroxyalkanoyloxy)alkanoic acids (HAAs) synthase | Burkholderia cenocepacia | 96% | KP202092 |
| rhlB | Alpha-3-L-rhamnosyl transferase | Dietzia cinnamea P4 | 92% | KP202071 |
| rhlC | Alpha-3-L-rhamnosyl transferase | Dietzia alimentaria | 90% | KP202091 |