Table 4. The effect of AS GYNNGY on protein sequences.
Total | Change < 10 AAsb | Change >10 AAsb | Frameshift | Stop (%)c | |
---|---|---|---|---|---|
Strongly regulateda | 75 | 0 (0%) | 1 | 74 | 54(72%) |
Other regulateda | 144 | 5 (3.5%) | 3 | 136 | 107(74%) |
Unregulateda | 291 | 7 (2.4) | 5 | 279 | 216(74%) |
aThe grouping of sites is as defined in the text, ‘strongly regulated’ sites have ΔUMS ≥ 0.25 and ‘other regulated’ consists of all other regulated sites.
bThese two types of changes occur when the translational frame is recovered to the original one through AS at the downstream acceptor site (the number of changed amino acids (AAs) are recorded).
cThe number of cases introducing stop codons in the immediate downstream exon. No difference exists between these three groups of sites (Fisher's exact test, all P-values > 0.1).