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. 2014 Dec 16;9(12):e115551. doi: 10.1371/journal.pone.0115551

Figure 4. OptiBET workflow.

Figure 4

Visual representation of the optiBET script workflow: (1) initial approximate brain extraction is performed using BET (and options ‘B’ and ‘f’, as suggested previously [5]); (2) sequential application of a linear and non-linear transformation from native space to MNI template space; (3) back-projection of a standard brain-only mask from MNI to native space; and (4) mask-out brain extraction.