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. Author manuscript; available in PMC: 2014 Dec 17.
Published in final edited form as: Bull Acad Vet Fr. 2014;167(3):10.4267/2042/54201. doi: 10.4267/2042/54201

Figure 2. Phylogeny of hantaviruses hosted by Chiroptera, Soricomorpha or Rodents.

Figure 2

Cladogram resulting of Bayesian (MCMC) analysis (GTR+I+G model), based on the entire coding region of the S gene (nucleotides 43–1341). Hantaviruses hosted by different host groups are highlighted in: red (Sigmodontinae-Neotominae), green (Arvicolinae), blue (Murinae), pink (Soricidae), light brown (Talpidae) and yellow (Chiroptera). The analysis used 1) an extent data set of the S gene coding region available on GenBank, including most of the hantavirus strains detected either in rodents or non-rodent mammals (Soricomorpha and Chiroptera), and 2) 11 complete S-segment sequences from moles captured either in Ozoir (4) or Bauvais (7). GenBank accession numbers: FJ539168, NVAV from Hungary; KF010573–KF010576, NVAV strains from Ozoir-la-Ferrière; KF010565–KF010571, NVAV strains from Beauvais. For Chiroptera and Soricomorpha hosts, see Table 1; for rodent hosts, see Herbreteau et al., 2007, Table 16.1.