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. Author manuscript; available in PMC: 2014 Dec 17.
Published in final edited form as: J Chem Theory Comput. 2012 Apr 18;8(10):3985–3991. doi: 10.1021/ct300148f

Figure 2.

Figure 2

Creation of an elastic network model. First, the model is reduced to just the Cα atoms. Next, springs are added for contacts that are close in sequence (up to i+3). Finally, springs are added for atoms that are close in space with a force constant that varies with distance. The strength of each spring is indicated by the thickness of each line.