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. 2014 May 15;26(1):21–33. doi: 10.1093/annonc/mdu192

Table 3.

Diagnostic workup of bronchoalveolar lavage (BAL) samples from febrile neutropenic patients with lung infiltrates

Recommended diagnostic program Evidence level
Cytospin preparations for distinguishing intracellular from extracellular pathogens and identifying infiltration by underlying malignancy B
Gram stain B
Giemsa or May-Grünwald-Giemsa stain (assessment of macrophages, ciliated epithelium, leukocytes) B
Mycobacterium tuberculosis (M. tuberculosis) polymerase chain reaction (PCR) A
PCR for Pneumocystis jirovecii (P. jirovecii); quantitative if possible A
Calcofluor white or equivalent (assessment of fungi and P. jirovecii) A
Direct immunofluorescence test for P. jirovecii (confirmatory) A
Aspergillus antigen (Galactomannan Sandwich ELISA) A
Bacteriological cultures (Quantitative or semi-quantitative): dilutions of 10−2 and 10−4; culture media: blood agar, MacConkey/Endo, Levinthal/blood (bacterial culture), Legionella-BCYE or equivalent (Legionella spp.), for mycobacteria at least one solid and one liquid medium (e.g. Löwenstein–Jensen agar and Middlebrook 7H9 broth or equivalent), Sabouraud/Kimmig or equivalent (fungal culture) A
Optional program
Enrichment culture (Brain–Heart Infusion broth, dextrose broth) C
Legionella PCR B
PCR for cytomegalovirus (CMV), Respiratory Syncytial Virus, influenza A/B, parainfluenza 1-3, metapneumovirus and adenovirus B
Quantitative PCR for Varicella Zoster Virus B
Panfungal or Aspergillus PCR B
Peripheral blood cultures 1 h after bronchoscopy to detect transient bacteremia C
Throat swab to assess oral flora in comparison with BAL C