Table 1. Summary of plasmid content.
| Genome | fimH allele | Strain virotype | MOBF12/IncF | Phage-related/RepFIB | MOBP12/IncI | MOBP6/IncI2 | MOBF11/IncN | MOBP3/IncX | MOBP11/IncP1 | MOBC12 d | MOBP5/ColE1-like | MOBQu d | MOBQ12 d | no-MOBd |
| FV9873 | H30 | A | pFV9873_5 (91.4 Kb; ΔTraI) | pFV9873_4 (33.3 Kb) | pFV9873_1 (4.1 Kb) | pFV9873_6 (5.2 Kb) | pFV9873_2 (2.2 Kb); pFV9873_3 (4.6 Kb) | |||||||
| BIDMC38 | H30 | A | pBIDMC38_5 (123 Kb) | pBIDMC38_1 (11.8 Kb) | pBIDMC38_4 (4.2 Kb) | pBIDMC38_2 (5.3 Kb) | pBIDMC38_3 (1.6 Kb) | |||||||
| E35BA | H30 | B | p35BA_2+3 (211 Kb) | IME_E35BA (14.2 Kb) | pE35BA_1 (4.1 Kb) | |||||||||
| E2022 | H30 | C | pE2022_2 (103 Kb) | pE2022_1 (98.3 Kb) | pE2022_3 (35.0 Kb) | pE2022_4 (4.1 Kb) | pE2022_5 (2.2 Kb) | |||||||
| BIDMC20B | H30 | C | pBIDMC20B_1 (128 Kb, ΔTraIb) | pBIDMC20B_2 (109 Kb) | ||||||||||
| BWH24 | H30 | C | pBWH24_1 (123 Kb, ΔTraIb) | pBWH24_2 (109 Kb) | pBWH24_3 (60.3 Kb) | |||||||||
| JJ1886 | H30 | C | pJJ1886-5 (110 Kb ΔTraI) | pJJ1886-4 (55.9 Kb) | pJJ1886-3 (5.6 Kb) | pJJ1886-2 (5.2 Kb) | pJJ1886-1 (1.6 Kb) | |||||||
| E61BA | H324 | D | pE61BA_1 (137 Kb) | pE61BA_7 (37.9 Kb) | pE61BA_4 (18.3 Kb) | pE61BA_2 (24.5 Kb) | pE61BA_5 (6.5 Kb); pE61BA_6 (6.9 Kb) | pE61BA_3 (5.5 Kb) | ||||||
| HVH177 | H22 | D | pHVH177_1 (78.6 Kb) | |||||||||||
| SE15 | H41 | Commensal | pECSF1 (122 Kb) | |||||||||||
| Other ST131 plasmids a | pEK516 (64.5 Kb, ΔTra); pEK499 (117 Kb, ΔTra); pJIE186-2c (138 Kb); pGUE-NDM (87.0 Kb) | pEK204 (93.7 Kb) | pKC394 (53.2 Kb); pKC396 (44.2 Kb); pNDM-ECS01 (41.2 Kb); pECN580 (64.9 Kb) | pJIE143 (34.3 Kb) | ||||||||||
a
Plasmid references: pEK516 ([93]; EU935738); pEK499 ([93]; EU935739); pJIE186-2 ([56]; NC_020271); pGUE-NDM (in [119]; JQ364967); pEK204 ([93]; EU935740); pKC394 ([120]; HM138652); pKC396 ([120], HM138653); pNDM-ECS01 (Unpublished; KJ413946); pECN580 ([121]; KF914891); pJIE143 ([94]; JN194214).
b
pBIDMC20B_1 and pBWH24_1 plasmids lacked the REL domain of the TrwC protein.
c
Plasmid pJIE186-2 was isolated from strain JIE186 [94], although GenBank acc. n° NC_020271 specifies it is located at EC958 strain. Strain JIE186 also contains plasmid pJIE186-1, not included in this study as it is not available at public DBs.
d
No correlation with RIP typing methods.