Table 3. Human E. coli ST131 genomes analyzed in this work.
| Strain | Accessiona | Location | Collection date | Isolation source | Plasmid name (Accession number)b | Reference |
| HVH-177 | PRJNA186205 | Denmark | 2003 | Blood | pHVH177_1 | PRJNA186413 |
| BIDMC20B | PRJNA202031 | USA | - | Urine | pBIDMC20B_1and _2 | PRJNA202876 |
| BWH24 | PRJNA201983 | USA | - | - | pBWH24_1 to _3 | PRJNA202876 |
| BIDMC38 | PRJNA202050 | USA | 2012 | - | pBIDMC38_1 to _5 | PRJNA202876 |
| FV9873 | PRJEB6262 | Spain | 2007 | Urine | pFV9873_1 to _6 | This study |
| E35BA | PRJEB6262 | Spain | 2008 | Urine | pE35BA_1 to _3, IME_E35BA | This study |
| E2022 | PRJEB6262 | Spain | 2006 | Urine | pE2022_1 to _5 | This study |
| E61BA | PRJEB6262 | Spain | 2008 | Abscess | pE61BA_1 to _7 | This study |
| SE15 | AP009378 | Japan | - | Feces | pECSF1 (AP009379) | [91] |
| JJ1886 | NC_022648.1 | USA | - | Urine | pJJ1886_1 to _5 (NC_022649; NC_022650; NC_022651; NC_022661; NC_022662) | [90] |
a
PRJNA and PRJEB6262 accession numbers correspond to SRA datasets. AP009378 and NC_022648.1 correspond to finished genomes.
b
Plasmids derived from this study are named according to Table 1.