Skip to main content
. 2014 Dec 19;5:724. doi: 10.3389/fpls.2014.00724

Table 3.

Content statistics for the revision and expansion of bna572.

bna572 bna572_revised bna572+
Genes 558 854 962a
Genes removed n/a 37 37
Compartment-specific metabolitesb 579 579 666
Metabolites (metabolite species) 376 376 457
Compartment-specific metabolites 579 579 666
Unique KEGG metabolite IDs 227 295 371
Unique Chebi metabolite IDs 0 270 333
Unique Pubchem metabolite IDs 0 296 372
Unique Inchi metabolite annotations 0 252 319
Compartments 11 11 11
Biomass components 8 8 15
Reactions 572 572 669a
Reactions with associated genes 367 463 543
Reactions with “AND” associated genes 0 66 66
Unique EC numbers 216 217 279
Unique references 76 91 98
Unique subsystems 35 84 93
Mass imbalanced reactions 130 8 9
Charge imbalanced reactions n/a 2 3
Reactions with a confidence score 0 572 669
Reactions with changed stoichiometric constraints n/a 6 6
Reactions with changed thermodynamic constraints n/a 0 0
Blocked reactionsc 0 0 0
a

Does not include 4 genes and 2 reactions added to genotype specific models (see Table 4).

b

Compartmentalized metabolite pools.

c

When there is an exchange reaction for myricetin[c].