Table 3.
Samples | Population | Analyses |
---|---|---|
Nasal swab/aspirate | Cases and controls | Molecular detection of viruses and bacteria S. pneumoniae typing |
Pleural effusion | Cases (if pleuritis) | Molecular detection of viruses and bacteria S. pneumoniae typing |
Whole blood | Cases | Molecular detection of viruses and bacteria |
S. pneumoniae typing | ||
Blood culture | ||
Blood count | ||
Serum | Cases | C-reactive protein |
Procalcitonin | ||
Urine | Cases | Broad antibiotic detection |