Table 2.
AHR2a and AHR2b target regions and oligonucleotides used in ZFN and CRISPR-Cas9-based mutagenesis. The ZFN target site is shown in capital letters. The sequence flanking the target sites are recognized by the ZFN proteins.
| Name | Description | Sequence |
|---|---|---|
| AHR2a exon 2 | ZFN target site | ctgcgcctcagcgtgGGATAcctgagggtcaagag |
| AHR2a exon 3 | ZFN target site | gactcattcagcttcTCTGAaggagagctgctgct |
| AHR2a exon 2 | CRISPR-Cas9 target site | GGAGCGAATCTCATCAGGGA |
| AHR2a exon 3 | CRISPR-Cas9 target site | GGGTGGCTCCTGGAGTCAAC |
| AHR2b exon2 | CRISPR-Cas9 target site | GGACCGTCTGAACGGCGAGC |
| AHR2b exon3 | CRISPR-Cas9 target site | GGGCGAAGGTCTGAGCGGTC |
| 2-ex3Fwd | AHR2a ZFN pair3 screening | TGTTTCACCTCCTGCACAGCTTCC |
| 1XRR1 | AHR2a ZFN pair3 screening | TACTAGCTAAACGTGACCTGTCG |
| 2a-ex3CrF | AHR2a CRISPR-Cas exon3 screening | CTGTTCTATCAGGTGGAGAGTCC |
| 2a-ex3CrR | AHR2a CRISPR-Cas exon3 screening | GTTGTTGGATGAGTATGCAGGTGG |
| AHR2b-CrF | AHR2b CRISPR-Cas9 exon2 screening | AATCTTTGATCCGGTCTGATCTGG |
| AHR2b-CrR | AHR2b CRISPR-Cas9 exon2 screening | AGACACAACCAAGCAGCAACACG |
| 2bex3-Fwd | AHR2b CRISPR-Cas9 exon3 screening | ATCGCCCAGCCTTAGCTTCCAGTCG |
| 2bex3-Rev | AHR2b CRISPR-Cas9 exon3 screening | GCGTTTTTGCTTTGTCTGCTGTCGG |
| Fh2A-ex3-CR1 | AHR2a exon3 gRNA oligo1 | TAGGGTGGCTCCTGGAGTCAAC |
| Fh2A-ex3-CR2 | AHR2a exon3 gRNA oligo2 | AAACGTTGACTCCAGGAGCCAC |
| FhAHR2b-CR1 | AHR2b exon2 gRNA oligo1 | TAGGACCGTCTGAACGGCGAGC |
| FhAHR2b-CR2 | AHR2b exon2 gRNA oligo2 | AAACGCTCGCCGTTCAGACGGT |
| Fh2B-ex3-CR1 | AHR2b exon3 gRNA oligo1 | TAGGGCGAAGGTCTGAGCGGTC |
| Fh2B-ex3-CR2 | AHR2b exon3 gRNA oligo2 | AAACGACCGCTCAGACCTTCGC |
| 2b-1aF | AHR1a off-target screening | GCTTAATCCTGCTTTCGTCTCTGC |
| Fh1a-ex2rev | AHR1a off-target screening | AAGAAGTGTTTGGCTCGTAGGTAGC |
| 2b-2aF | AHR2a off-target screening | TTTTACCCCTCACGGAAGAAGATGG |
| Fh2a-ex2rev | AHR2a off-target screening | GTAGCTCTTGACCCTCAGGTATCC |
| 2b-1bF | AHR1b off-target screening | TTTCCTCCTCTCCAGAGCCAAACC |
| Fh1b-ex2rev | AHR1b off-target screening | AAGAAGCTCTTGGTGCGCAGGTAGC |
| RR-ex2fwd | AHRR off-target screening | CTCATCCCTTCTGCCGTCTCGTCC |
| RR-ex2rev | AHRR off-target screening | AAGAAGCTTTTGACGCGGAGGTAGG |