Table 4.

Development of additional markers for fine mapping

Position (cM)	Jatropha curcas marker	Bridge marker used	J. curcas genome sequence		R. communis genome sequence
			Scaffold	Marker position	Scaffold	Syntenic region
34.8	NG291	N/A	Jcr4S04633	10 436–10 735	30 174	2 724 054–2 749 754
34.8	JCT3	N/A	Jcr4S01892	18 299–18 382	30 174	2 695 280–2 722 645
35.1	G284	N/A	Jcr4S00160	23 304–23 696	30 174	2 663 765–2 686 270
35.4	NG289B	N/A	Jcr4S03474	13 586–13 985	30 174	2 642 521–2 666 724
36.0	NG288C	N/A	Jcr4S00541	36 116–36 276	30 174	2 553 645–2 632 854
36.4	NG287B	N/A	Jcr4S04231	31 626–31 926	30 174	2 521 238–2 536 532
36.5	NG286D	N/A	Jcr4S00188	39 908–40 226	30 174	2 442 869–2 507 050
36.8	NG286A	N/A	Jcr4S00188	10 227–10 414	″	″
37.6	NG285A	N/A	Jcr4S00012	9750–10 085	30 174	2 278 471–2 410 014
38.4	G262	SNP10542	Jcr4S05837	4261–4517	29 996	51 566–62 602
38.4	NG331C	N/A	Jcr4S01963	25 834–26 225	29 996	62 985–63 609
38.8	G270B	1404867|12356283	Jcr4S03364	6780–6962	29 747	274 981–367 675
38.8	G270D	1404867|12356283	Jcr4S03364	17 347–17 502	″	″
39.1	G282B	SNP5294	Jcr4S01263	23 937–24 259	Low level of synteny
39.9	G273A	1400435|12286473	Jcr4S08292	1249–1548	Low level of synteny
40.2	G268	1401665|12362006	Jcr4S01025	42 898–43 155	28 266	19 280–78 337
42.2	G269	eSNP0195	Jcr4S01910	8711–8987	Low level of synteny
47.0	1401433|12335072	N/A	Jcr4S02123	25 922–25 718	Low level of synteny