Table 1. Sequence data of barley HvCKX gene family members published in NCBI databases.
Gene | Acc. number | Genomic (bp) | cDNA (bp) | Exons | Protein | CDS | References |
CKX1 | JF495479 | 2320 | 917 | 2 | 305 | partial | [17] |
CKX2 a | AF490591 | 1954 | 1576 | 5 | 526 | complete | [37] |
CKX2.1 | JF495488* | 4060 | 1701 | 3 | 567 | complete | [17] |
CKX2.2 | JF495489* | 3278 | 1692 | 3 | 564 | complete | [17] |
CKX3 | JF495480 | 3165 | 1222 | 4 | 408 | partial | [17] |
CKX4 | JF495481 | 1920 | 1432 | 5 | 477 | complete | [17] |
CKX5 b | AK370106 | NI | 1598 | 532 | complete | [18] | |
CKX5 | JF495482 | 3952 | 1842 | 4 | 614 | partial | [17] |
CKX7 | JF495483 | 1601 | 1601 | 1 | 533 | complete | [17] |
CKX8 | JF495487** | 1264 | 830 | 4 | 227 | partial | [17] |
CKX9 | JF495484 | 1954 | 1576 | 5 | 526 | complete | [17] |
CKX10 | JF495485 | 1531 | 1391 | 2 | 464 | partial | [17] |
CKX11 | JF495486 | 1319 | 699 | 3 | 233 | partial | [17] |
- annotated by Mameaux et al. [17] as HvCKX9 (99% homology to HvCKX2)
*- located on chromosome 3H
** - located on chromosome 2H
- predicted HvCKX gene name
NI – not identified. Analyzed genes are underlined.