Table 1. Genome-wide association result for the top 20 single-nucleotide polymorphisms (SNPs) in a comparison of AERD with NC.
SNP | Chr | Physical Location | Gene | Location | MAF | P value§ | |
AERD (n = 179) | NC (n = 1989) | ||||||
rs3117230 | 6p21.32 | 33183613 | intergenic | 0.16 | 0.08 | 3.61E–06 | |
rs751355 | 18p11.22 | 9418420 | intergenic | 0.46 | 0.34 | 4.98E–06 | |
rs3128965 | 6p21.32 | 33163877 | HLA-DPB1 | downstream | 0.16 | 0.08 | 6.06E–06 |
rs12576973 | 11q24.2 | 126763852 | intergenic | 0.22 | 0.14 | 9.10E–06 | |
rs10895516 | 11q22.3 | 103113180 | intergenic | 0.30 | 0.20 | 9.89E–06 | |
rs12577873 | 11q24.2 | 126767198 | intergenic | 0.22 | 0.14 | 1.00E–05 | |
rs2618221 | 11q24.2 | 126757104 | intergenic | 0.22 | 0.14 | 1.03E–05 | |
rs17101477 | 11q22.3 | 103111948 | intergenic | 0.30 | 0.20 | 1.70E–05 | |
rs2697717 | 11q24.2 | 126709174 | intergenic | 0.25 | 0.16 | 1.96E–05 | |
rs1343036 | 3q26.2 | 170724940 | MECOM | Intron | 0.23 | 0.15 | 2.17E–05 |
rs5755393 | 22q12.3 | 33607037 | ISX | intergenic | 0.38 | 0.50 | 3.80E–05 |
rs16968024 | 17q11.2 | 28465300 | ACCN1 | Intron | 0.15 | 0.08 | 3.90E–05 |
rs477963 | 17q25.1 | 70153035 | intergenic | 0.16 | 0.10 | 4.13E–05 | |
rs2038088 | 22q12.3 | 33595255 | intergenic | 0.38 | 0.50 | 4.32E–05 | |
rs10893679 | 11q24.2 | 126786589 | intergenic | 0.22 | 0.14 | 4.75E–05 | |
rs12495069 | 3q26.2 | 170703798 | MECOM | Intron | 0.24 | 0.16 | 5.58E–05 |
rs6579884 | 5q33.1 | 151016491 | intergenic | 0.14 | 0.08 | 5.63E–05 | |
rs6444857 | 3q26.2 | 170721406 | MECOM | Intron | 0.23 | 0.15 | 5.90E–05 |
rs904664 | 12p13.33 | 99608 | IQSEC3 | 5'UTR | 0.06 | 0.03 | 6.46E–05 |
rs7934354 | 11p15.4 | 5522482 | OR52H1 | Exon | 0.29 | 0.40 | 7.44E–05 |
Cochran–Armitage trend test.
Abbreviations: AERD, aspirin-exacerbated respiratory disease; NC, normal controls, MAF, minor allele frequency; HLA-DPB1, major histocompatibility complex, class ii, dp beta 1; ACCN1, amiloride-sensitive cation channel 1; MECOM; MDS1 and EVI1 complex locus; IQSEC3, iq motif and sec7 domain 3, OR52H1, olfactory receptor, family 52, subfamily h, member 1.