Table 1.
The RSCU values and used codon numbers in the gDNA and mtDNA of B. mori
| AA | Codon | RSCU/number | AA | Codon | RSCU/number | ||
|---|---|---|---|---|---|---|---|
| gDNA | mtDNA | gDNA | mtDNA | ||||
| Phe | TTT * | 0.78/6894 | 1.92/1439 | Tyr | TAT * | 0.78/6250 | 1.88/641 |
| TTC | 1.22/10823 | 0.08/63 | TAC | 1.22/9918 | 0.12/42 | ||
| Asn | AAT * | 0.90/9230 | 1.76/790 | Cys | TGT * | 0.88/3929 | 1.76/790 |
| AAC | 1.10/11200 | 0.24/108 | TGC | 1.12/5094 | 0.24/108 | ||
| Lys | AAA * | 1.10/15283 | 1.84/414 | Arg | CGT | 1.04/4399 | 0.72/58 |
| AAG | 0.90/12759 | 0.16/37 | CGC | 1.14/4711 | 0.00/0 | ||
| Leu | TTA * | 0.96/5885 | 5.22/1640 | CGA | 0.78/3153 | 1.26/97 | |
| TTG | 1.14/7124 | 0.36/114 | CGG | 0.60/2423 | 0.06/4 | ||
| CTT | 0.84/5193 | 0.12/37 | AGA | 1.50/6325 | 3.90/301 | ||
| CTC | 1.04/6570 | 0.00/0 | AGG | 0.96/4011 | 0.06/4 | ||
| CTA | 0.66/3941 | 0.30/96 | Ser | TCT * | 1.08/5718 | 2.70/378 | |
| CTG | 1.32/8268 | 0.00/3 | TCC | 1.022/5399 | 0.30/39 | ||
| Pro | CCT * | 1.08/6283 | 1.80/165 | TCA | 1.08/5846 | 2.04/292 | |
| CCC | 0.88/5256 | 0.44/42 | TCG | 0.90/4969 | 0.00/2 | ||
| CCA | 1.04/6110 | 1.68/155 | AGT | 0.84/4632 | 0.90/128 | ||
| CCG | 1.00/5860 | 0.08/8 | AGC | 1.02/5618 | 0.06/9 | ||
| Thr | ACT | 1.08/7037 | 1.40/163 | Asp | GAT * | 0.94/11523 | 1.90/176 |
| ACC | 1.00/6390 | 0.28/34 | GAC | 1.06/12971 | 0.10/9 | ||
| ACA * | 1.12/7146 | 2.24/265 | Glu | GAA * | 1.16/16217 | 1.80/216 | |
| ACG | 0.84/5350 | 0.08/8 | GAG | 0.84/11781 | 0.20/24 | ||
| Val | GTT * | 1.04/7558 | 2.20/254 | Gly | GGT | 1.24/9761 | 1.72/260 |
| GTC | 1.04/7502 | 0.04/4 | GGC | 1.08/8443 | 0.16/22 | ||
| GTA | 0.76/5588 | 1.72/195 | GGA * | 1.24/9636 | 1.80/275 | ||
| GTG | 1.20/8735 | 0.04/5 | GGG | 0.44/3465 | 0.32/51 | ||
| Ala | GCT * | 1.40/11368 | 2.64/226 | Ile | ATT | 1.02/8391 | 1.77/1508 |
| GCC | 1.08/8860 | 0.20/16 | ATC | 1.11/9321 | 0.09/80 | ||
| GCA | 0.80/6556 | 1.12/97 | ATA | 0.87/7173 | 1.14/956 | ||
| GCG | 0.72/6066 | 0.04/4 | Trp | TGG | 1.00/5272 | 1.00/29 | |
| Met | ATG | 1.00/10544 | 1.00/94 | Gln | CAA | 1.04/8409 | 1.76/168 |
Note: The preferentially used codons base on RSCU values for gDNA and mtDNA are in bold and italics, respectively. Asterisk (*) refers to the high frequency codons in mtDNA.