Table 1.
Population | Chr | No. CR | CR SNPs1 | CR length2 (kb) | Chr length (Mbp) | CR length/Chr length3 | Chr SNPs (n) | CR SNPs/Chr SNPs4 |
---|---|---|---|---|---|---|---|---|
Yorkshire | 1 | 139 | 17 | 3693.918 | 295.5 | 0.013 | 9028 | 0.015 |
2 | 190 | 24 | 2169.685 | 140.1 | 0.015 | 9557 | 0.020 | |
3 | 130 | 19 | 2832.248 | 123.6 | 0.023 | 7506 | 0.017 | |
4 | 136 | 17 | 2089.096 | 136.3 | 0.015 | 5796 | 0.023 | |
5 | 31 | 7 | 445.340 | 100.5 | 0.004 | 3736 | 0.008 | |
6 | 186 | 34 | 2529.724 | 123.3 | 0.021 | 12 910 | 0.014 | |
7 | 168 | 21 | 3167.319 | 136.4 | 0.023 | 5817 | 0.029 | |
8 | 17 | 2 | 358.194 | 120 | 0.003 | 3687 | 0.005 | |
9 | 184 | 27 | 2978.478 | 132.5 | 0.022 | 5202 | 0.035 | |
10 | 70 | 7 | 941.014 | 66.7 | 0.014 | 3148 | 0.022 | |
11 | 44 | 8 | 611.479 | 79.8 | 0.008 | 3795 | 0.012 | |
12 | 85 | 11 | 773.873 | 57.4 | 0.013 | 4028 | 0.021 | |
13 | 79 | 9 | 3345.927 | 145.2 | 0.023 | 4661 | 0.017 | |
14 | 113 | 19 | 1084.485 | 148.5 | 0.007 | 7094 | 0.016 | |
15 | 48 | 10 | 547.061 | 134.5 | 0.004 | 4968 | 0.010 | |
16 | 40 | 6 | 868.423 | 77.4 | 0.011 | 2796 | 0.014 | |
17 | 49 | 8 | 1005.974 | 64.4 | 0.016 | 3079 | 0.016 | |
18 | 32 | 3 | 434.741 | 54.3 | 0.008 | 2006 | 0.016 | |
X | 20 | 2 | 220.651 | 125.9 | 0.002 | 3356 | 0.006 | |
Total | 1761 | 251 | 30097.630 | 2262.3 | 0.013 | 102 170 | 0.017 | |
Landrace | 1 | 80 | 11 | 1 823 125 | 295.5 | 0.006 | 9028 | 0.009 |
2 | 137 | 24 | 2 477 535 | 140.1 | 0.018 | 9557 | 0.014 | |
3 | 81 | 14 | 911 766 | 123.6 | 0.007 | 7506 | 0.011 | |
4 | 65 | 12 | 719 409 | 136.3 | 0.005 | 5796 | 0.011 | |
5 | 57 | 12 | 1 623 945 | 100.5 | 0.016 | 3736 | 0.015 | |
6 | 108 | 18 | 598 300 | 123.3 | 0.005 | 12910 | 0.008 | |
7 | 126 | 16 | 1 154 729 | 136.4 | 0.008 | 5817 | 0.022 | |
8 | 42 | 7 | 1 025 267 | 120 | 0.009 | 3687 | 0.011 | |
9 | 232 | 31 | 4 361 383 | 132.5 | 0.033 | 5202 | 0.045 | |
10 | 70 | 14 | 1 188 160 | 66.7 | 0.018 | 3148 | 0.022 | |
11 | 94 | 14 | 2 351 956 | 79.8 | 0.029 | 3795 | 0.025 | |
12 | 105 | 17 | 960 269 | 57.4 | 0.017 | 4028 | 0.026 | |
13 | 73 | 12 | 1 880 105 | 145.2 | 0.013 | 4661 | 0.016 | |
14 | 122 | 24 | 1 048 849 | 148.5 | 0.007 | 7094 | 0.017 | |
15 | 132 | 21 | 3 050 612 | 134.5 | 0.023 | 4968 | 0.027 | |
16 | 17 | 5 | 383 365 | 77.4 | 0.005 | 2796 | 0.006 | |
17 | 35 | 8 | 720 063 | 64.4 | 0.011 | 3079 | 0.011 | |
18 | 8 | 1 | 13 433 | 54.3 | 0.000 | 2006 | 0.004 | |
X | 50 | 8 | 541 350 | 125.9 | 0.004 | 3356 | 0.015 | |
Total | 1634 | 269 | 2 683 3621 | 2262.3 | 0.012 | 102 170 | 0.016 |
Number of SNPs forming significant core regions.
Total length covered by significant core regions.
Proportion of total significant core region lengths on chromosome length.
Proportion of total number of SNPs forming significant core regions on number of SNPs used.