Table 2. Most Highly Expressed M. perniciosa Genes during the Green Broom Stage of WBD.

			Gene Expression Values (RPKM)
Gene ID	Gene Annotation	Length (aa)a	I1	I2	I3	I4	I5	Mean
MP13831	No hits (CSEP)	185	47,106	73,411	92,642	81,894	99,895	78,990
MP14755	No hits (CSEP)	246	81,666	50,657	67,109	81,134	63,814	68,876
MP14757	No hits (CSEP)	270	22,364	19,546	25,939	27,095	36,987	26,386
MP15869	No hits	243	36,079	10,330	17,487	24,296	19,698	21,578
MP13352	MpPR-1g	252	9,121	16,141	17,621	20,775	20,990	16,930
MP15868	Hypothetical protein	143	17,204	5,903	10,031	12,341	12,508	11,597
MP16558	No hits (CSEP)	269	12,680	9,664	9,827	10,544	12,103	10,964
MP09913	No hits (CSEP)	84	2,166	13,141	13,579	9,870	11,194	9,990
MP14724	No hits	203	8,858	7,721	11,358	8,550	11,281	9,554
MP13834	No hits (CSEP)	183	5,449	6,958	11,154	10,006	12,669	9,247
MP13136	No hits	97	2,741	10,858	10,471	8,982	9,493	8,509
MP09729	Alcohol dehydrogenase	347	5,849	13,822	8,228	6,722	6,577	8,240
MP09537	Glycoside hydrolase 18	438	8,276	6,000	6,013	7,077	6,662	6,805
MP15315	MpCP12	155	3,881	5,014	6,892	4,963	5,948	5,339
MP15025	Endoglucanase v-like	157	2,618	5,578	5,479	5,764	4,372	4,762
MP15342	Endo-polygalacturonase	385	3,198	1,998	5,065	5,894	5,545	4,340
MP16511	MpCP11	186	4,228	4,687	3,871	3,288	4,170	4,049
MP04874	Elongation factor ef1-α	460	4,877	4,243	4,033	3,799	3,172	4,025
MP12125	MpPR-1 h	245	6,069	2,605	3,137	4,132	4,178	4,024
MP15312	MpCP4	192	3,966	3,115	4,043	4,003	4,172	3,860

^aaa, amino acids.