Table 2. Genotype frequency, distribution, and genotype-specific mean age at death of the SNPs associated with lifespan.
Gene | Chromosome | rs# | Position | Genotype | Genotype frequency | Age at death | q-value | Partial correlation* |
SIRT3 | 11p15.5 | rs511744 | 209089 | CC | 591 | 87.2 | 0.046 | 0.0053 |
CT | 494 | 88.0 | ||||||
TT | 106 | 88.5 | ||||||
Missing | 1 | |||||||
SIRT5 | 6p23 | rs2841505 | 13679574 | TT | 534 | 88.1 | 0.043 | 0.0053 |
TG | 539 | 87.3 | ||||||
GG | 119 | 86.8 | ||||||
Missing | ||||||||
SIRT6 | 19p13.3 | rs107251 | 4127085 | CC | 940 | 87.6 | 0.012 | 0.0075 |
CT | 239 | 88.0 | ||||||
TT | 10 | 82.1 | ||||||
Missing | 3 | |||||||
SOD3 | 4p15.2 | rs2536512 | 24801315 | GG | 483 | 88.9 | 0.048 | 0.0057 |
GA | 466 | 87.8 | ||||||
AA | 124 | 87.4 | ||||||
Missing | 119 | |||||||
FOXO3 | 6q21 | rs4946935 | 109000742 | GG | 540 | 87.3 | 0.042 | 0.0058 |
GA | 469 | 87.7 | ||||||
AA | 111 | 88.9 | ||||||
Missing | 72 |
*The partial correlation is a measure of the strength of the relationship between the SNP and mean age at death after controlling for gender, comorbidity count, smoking, alcohol consumption, BMI and the BMI × smoking interaction effect.
Of the 45 SNPs where the SNP × gender interaction effect was not significant, SIRT3, 5, 6, FOXO3 and SOD3 SNPs were associated with age at death. All SNPs gene, rs number, chromosome, chromosome position, genotype frequency, age at death, q-value and partial correlation are given.