Table 1. Primer sequence and reaction condition.
SNPs | Primer sequence | Annealing temperature | Restriction enzyme | Product size (bp) |
rs2228570 | F: 5′-AGCTGGCCCTGGCACTGACTCTGGCTCT-3′ | 60.0°C | BseG I | CC: 267 bp |
R: 5′-ATGGAAACACCTTGCTTCTTCTCCCTC-3′ | CT: 267+204+63 bp | |||
TT: 204+63 bp | ||||
rs3782905 | F: 5′-AAGACATGGTGTCTGCTTCA-3′ | 56.0°C | HpyF3 I | CC: 223+81 bp |
R: 5′-GGTTAGATCGATATGTTTGA-3′ | CG: 304+223+81 bp | |||
GG: 304 bp | ||||
rs7041 | F: 5′-AAATAATGAGCAAATGAAAGAAGAC-3′ | 56.0°C | BsuR I | TT: 482 bp |
R: 5′-CAATAACAGCAAAGAAATGAGTAGA-3′ | TG: 482+298+184 bp | |||
GG: 298+184 bp | ||||
rs11568820 | F1: 5′-AGGATAGAGAAAATAATAGAAAACATT-3′ | 45.0°C | GG: 297+110 bp | |
R1: 5′-AACCCATAATAAGAAATAAGTTTTTAC-3′ | GA: 297+235+110 bp | |||
F2: 5′-TCCTGAGTAAACTAGGTCACAA-3′ | AA: 297+235 bp | |||
R2: 5′-ACGTTAAGTTCAGAAAGATTAATTC-3′ |