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. 2014 Dec 26;9(12):e116169. doi: 10.1371/journal.pone.0116169

Figure 1. Polygenic summary score associated with CHIEF pathway for colorectal cancer survival.

Figure 1

1SNPs included in score: BMP2 rs1979855, rs3178250, BMPR1A rs7895217, rs10887668, BMPR1B rs10049681, rs4699673, rs12508087, rs9307147, rs4490463, rs2120834, DUSP2 rs1724120, EIF4EBP3 rs250425, IFNGR1 rs3799488, rs9376267, rs1327474, IGF1, IKBKB rs5029748, rs10958713, IL1B rs1143627, rs1143623, IL6 rs1800796, IRF2 rs6856910, rs793777, rs2797507, rs12504466, rs793814, rs7655800, rs9684244, rs13139310, rs13116389, rs793801, rs3775582, IRF8 rs305083, rs305080, rs11649318, rs13338943, rs10514611, rs1044873, JAK2 rs1887429, rs7043371, rs10974947, rs3780379, rs10815160, JUNB rs2229510, MAP3K10 rs1129156, MMP1 rs470215, MMP3 rs3025066, NFKBIA rs696, rs2233409, rs3138053, NOS2A rs7406657, rs2297516, PIK3CA rs2699905, rs7640662, rs2677760, rs1607237, RPS6KA2 rs2049956, rs1894660, rs6918886, rs932356, rs9459715, rs1883361, rs4710090, rs661325, rs2345067, rs2072638, rs1309150, rs7745781, SEP15 rs9433110, SEPX1 rs732510, SMAD3 rs1498506, rs9972423, rs2118611, rs11071933, rs7163381, rs4776892, rs2414937, rs745103, rs893473, rs1866317, rs4601989, rs11639295, rs12708492, SOCS1 rs4780355, STAT3 rs1053005, rs2293152, rs8069645, STAT5A rs12601982, TLR2 rs5743704, rs5743708, TYK2 rs12720356, rs280521, rs280523, VDR_Fok1, VDR_Poly. 2SNPs included in score: BMP1 rs12114940, rs3924229, rs3857979, BMPR1A rs7088641, rs2168730, rs7895217, rs4934275, ESR2_Rsa, IL1A rs3783546, IL2RA rs2386841, rs7072398, rs11256456, rs11256457, rs6602398, rs11256497, rs791587, rs10905669, rs2476491, rs2256774, rs706779, rs706778, rs3118470, IL3 rs181781, IL8RA rs1008563, rs1008562, rs16858811, IL8RB rs1126579, IRF2 rs809909, rs10009261, rs1425551, rs807684, rs3756094, PRKAG2 rs1541538, rs2536082, rs6947064, rs7805747, rs1860743, rs10278273, rs7801616, rs7784818, rs3934597, RAF1 rs3729931, rs9809501, rs11923427, rs4684871, rs904453, RUNX3 rs7517302, rs2135756, SEPX1 rs13331553, rs732510, SOCS1 rs193779, STK11 rs8111699, rs741765, TSC2 rs2074968.