TABLE 2.
Read counts, OTU counts, and alpha diversity indices for mcrA and 16S genesa
| Treatment plant |
mcrA |
16S |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| No. of reads (no. rarefied) | No. of OTU (no. rarefied) | Chao1 | H′ | J′ | No. of reads (no. rarefied) | No. of OTU (no. rarefied) | Chao1 | H′ | J′ | |
| GZ | 3,388 (3,388) | 119 (119) | 371 | 1.2 | 0.36 | 1,159 (1,159) | 85 (88) | 194 | 2.0 | 0.59 |
| ST | 4,947 (3,388) | 214 (167) | 538 | 1.6 | 0.46 | 2,849 (1,159) | 119 (58) | 317 | 0.97 | 0.34 |
| SWH | 3,717 (3,388) | 221 (215) | 580 | 1.7 | 0.50 | 2,682 (1,159) | 105 (67) | 202 | 1.5 | 0.49 |
| YL | 4,582 (3,388) | 210 (180) | 592 | 1.2 | 0.38 | 1,756 (1,159) | 138 (109) | 272 | 2.1 | 0.63 |
a
Alpha diversity indices were calculated from rarefied read sets. The numbers of reads refer to reads that passed quality checks.