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. 2014 Nov 19;136(50):17513–17529. doi: 10.1021/ja5089452

Table 1. Summary of Simulated Rate Constants for the HalM2/His6P-HalA2 Reaction.

kx best fit ± SE (min–1) FitSpace boundaries (min–1)b knet (μM–1 min–1)c max concn (μM)d processivity factore
kon 10a held constant      
koff 18 held constant      
k7→8 17 ± 0.8 15.1–18.8 4.9   0.94
k8→9 61 ± 3 57.1–70.2 7.7 2.7 3.4
k9→10 25 ± 3 15.7–38.4 5.8 1.3 1.4
k9→14 104 ± 5 90.7–117 8.5 1.3 5.8
k10→15 104 fixed relative to k9→14 8.5 0.4 5.8
k14→15 81 ± 4 70.3–89.1 8.2 1.5 4.5
k15→16 36 ± 1.3 32.9–40.3 6.7 3.7 2.0
k16→17 16 ± 0.8 13.9–17.6 4.7 6.2 0.89
k17→18 23 ± 1.7 18.5–28.9 5.6 3.1 1.3
k16→19 2.5 ± 0.26 1.88–3.18 1.2 6.2 0.14
k17→20 5.0 fixed relative to k16→19 2.2 3.1 0.28
k18→21 20 ± 1.8 16.1–25.2 5.3 3.3 1.1
k19→20 19 ± 2.7 12–29.3 5.1 0.8 1.1
k20→21 32 ± 1.9 26.6–39.5 6.4 0.8 1.8
k21→22 58 fixed relative to k20→21 7.6 1.5 3.2
k22→4 41 fixed relative to k20→21 6.9 2.2 2.3
a

kon is in units of μM–1 min–1.

b

FitSpace boundaries are given as 1.12 times the χ2 minimum of the best fit. See Methods for additional details.

c

knet = (konkx)/(koff + kx). knet is a second-order rate constant that serves as an approximation of kcat/Km.

d

Refers to the maximum observed concentration of the substrate for the indicated reaction. The total peptide concentration was 40 μM.

e

Processivity factor is defined as kx/koff