Table 2. Differential expression of the predicted targets of the top dysregulated miRNAs in MDA-MB-231 cell lines with KLK5 reconstituted expression.
Up-regulated miRNA | Gene mRNA Target in Homo sapiens | Down-regulated miRNA | Gene mRNA Target in Homo sapiens | ||||
---|---|---|---|---|---|---|---|
miRNA | Fold Change* | Symbol | mRNA Dysregulation** | miRNA | Fold Change* | Symbol | mRNA Dysregulation** |
miR-183-5p | 83.4 | CX3CL1 | −3.85 | miR-935 | −225.3 | TNRC6B | 1.48 |
TUB | −2.13 | DNMT3B | 1.59 | ||||
RPS6KA3 | −1.56 | ARL3 | 1.65 | ||||
miR-206 | 30.41 | DNAL1 | −2 | HMGB1 | 1.77 | ||
MPZL1 | −1.89 | MBNL2 | 1.82 | ||||
NMT2 | −1.69 | miR-519a-3p | −102.1 | FMNL3 | 1.46 | ||
SLC7A6 | −1.59 | TNRC6B | 1.48 | ||||
HIGD1A | −1.54 | C1orf63 | 1.53 | ||||
HSPD1 | −1.47 | GLS | 1.61 | ||||
DLG4 | −1.47 | ZFHX4 | 1.64 | ||||
G3BP2 | −1.47 | SLC25A23 | 1.64 | ||||
POLA1 | −1.45 | ATM | 1.75 | ||||
PLCG1 | −1.45 | SORL1 | 1.83 | ||||
miR-181c-5p | 25.59 | CYP26B1 | −2.13 | LDLR | 1.97 | ||
TUB | −2.13 | ZHX2 | 2.31 | ||||
DNAL1 | −2 | FILIP1L | 3.69 | ||||
FGFR3 | −1.89 | miR-888-5p | −48.29 | KIF1B | 1.6 | ||
RASSF2 | −.185 | DEPDC1B | 1.68 | ||||
NMT2 | −1.69 | SORL1 | 1.83 | ||||
ZNF594 | −1.67 | ZHX2 | 2.31 | ||||
RPS6KA3 | −1.56 | KCTD12 | 2.36 | ||||
G3BP2 | −1.47 | miR-10b-5p | −20.12 | TNRC6B | 1.48 | ||
POLA1 | −1.45 | RBMS3 | 1.81 | ||||
miR-449b-5p | 14.99 | LMTK3 | −3.57 | SIX4 | 1.83 | ||
SYNJ1 | −1.75 | STARD13 | 2.01 | ||||
NMT2 | −1.69 | NAV1 | 2.28 | ||||
SLC7A6 | −1.59 | miR-520d-3p | −17.312 | MRPS25 | 1.44 | ||
PLCG1 | −1.45 | FMNL3 | 1.46 | ||||
C16orf5 | −1.43 | TNRC6B | 1.48 | ||||
miR-1301 | 13.5 | NBL1 | −1.67 | ARHGEF18 | 1.49 | ||
G3BP2 | −1.47 | RAB22A | 1.59 | ||||
miR-335-5p | 4.742424 | NMT2 | −1.69 | GLS | 1.61 | ||
PDCD4 | 1.64 | ||||||
ZFHX4 | 1.64 | ||||||
FNDC3A | 1.68 | ||||||
SLC35E1 | 1.82 | ||||||
MBNL2 | 1.82 | ||||||
miR-1255b-5p | −14.962 | NAV1 | 2.28 | ||||
FILIP1L | 3.69 | ||||||
miR-650 | −12.622 | TNRC6B | 1.48 | ||||
ZFHX4 | 1.64 | ||||||
TRAF1 | 1.69 | ||||||
SORL1 | 1.83 | ||||||
SCD | 4.99 | ||||||
miR-342-3p | −10.714 | DLGAP4 | 1.59 | ||||
ZFHX4 | 1.64 | ||||||
SORL1 | 1.83 |
Assessed by qRT-PCR screening
Assessed by Illumina Chip