Table 1. Differentially regulated genes in subdermal abscesses identified by microarray that overlap with a previously conducted subdermal abscess RIVET screen [11].

Category1	Locus	Gene Description
2 h microarray UP +8 h microarray UP+RIVET sense
	EF1672	permease protein
2 h microarray UP+RIVET sense
	EF0031	hypothetical protein
	EF0246	ABC superfamily ATP binding cassette transporter, ABC protein
	EF0475	ferrous iron transport protein A
	EF0697	hypothetical protein
	EF0849	alanine racemase
	EF1084	universal stress protein
	EF2355	chaperone protein ClpB
	EF2987	integrating conjugative element protein
8 h microarray UP+RIVET sense
	EF0383	hypothetical protein
2 h microarray DOWN +8 hmicroarray DOWN+RIVET antisense
	EF1360	dihydroxyacetone kinase
	EF1614	DNA topoisomerase subunit A
	EF2623	P-ATPase superfamily P-type ATPase cadmium transporter
2 h microarray DOWN+RIVET antisense
	EF0004	recombination protein F
	EF1112	exonuclease RexB
8 h microarray DOWN+RIVET antisense
	EF0005	DNA gyrase subunit B
	EF0013	replicative DNA helicase DnaB
	EF0225	50S ribosomal protein L30
	EF0226	50S ribosomal protein L15
	EF0724	glutamyl-tRNA(Gln) amidotransferase subunit C
	EF0801	leucyl-tRNA synthetase
	EF0909	oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein
	EF0988	cell division protein MraZ
	EF1003	isoleucine–tRNA ligase
	EF1146	DNA-directed RNA polymerase sigma subunit RpoE
	EF1361	dihydroxyacetone kinase
	EF1522	RNA polymerase sigma factor rpoD
	EF1550	DNA-binding protein HU
	EF1580	hypothetical protein
	EF1629	ethanolamine ammonia-lyase large subunit
	EF2397	elongation factor EF1B
	EF2398	30S ribosomal protein S2
	EF2908	group 2 glycosyl transferase
	EF3178	succinyl-diaminopimelate desuccinylase
	EF3270	glutathione-disulfide reductase
	EF3278	hypothetical protein

¹Microarray UP and Microarray DOWN indicate that the locus was up- or down-regulated, respectively, in microarray analysis at the indicated time point.