TABLE 2.
Antigenic formulas for the Salmonella strains used for multiplex PCR identification of the first-phase flagellar antigens
| Serogroup | Serotype | Antigenic formula | Na | Amplicon size (bp) | Serogroup | Serotype | Antigenic formula | Na | Amplicon size (bp) | |
|---|---|---|---|---|---|---|---|---|---|---|
| A | Kiel | 1,2,12:g,p:− | 1 | 500 | ||||||
| B | Derby | 4,[5],12:f,g:1,2 | 2 | 500 | ||||||
| B | Agona | 4,12:f,g,s:− | 3 | 500 | ||||||
| B | California | 4,12:g,m,t:− | 1 | 500 | ||||||
| C-1 | Rissen | 6,7:f,g:− | 4 | 500 | ||||||
| C-1 | Montevideo | 6,7:g,m,s:− | 3 | 500 | ||||||
| C-1 | Oranienburg | 6,7,14:m,t:[z57] | 1 | 500 | ||||||
| D-1 | Berta | 1,9,12:[f],g,[t]:− | 1 | 500 | ||||||
| D-1 | Budapest | 1,4,12,27:g,t:− | 1 | 500 | ||||||
| D-1 | Moscow | 1,9,12:g,q:− | 1 | 500 | ||||||
| D-1 | Naestved | 1,9,12:g,p,s:− | 1 | 500 | ||||||
| D-1 | Rostock | 1,9,12:g,p,u:− | 1 | 500 | ||||||
| D-1 | Pensacola | 9,12:m,t:− | 1 | 500 | ||||||
| E-4 | Senftenberg | 1,3,19:g,s,t:− | 2 | 500 | ||||||
| N | Wayne | 30:gz51:− | 1 | 500 | ||||||
| D-1 | Enteritidis | 9,12:g,m:− | 7 | 500 and 333 | ||||||
| C-2 | Hadar | 6,8:z10:e,n,x | 11 | 400 | ||||||
| C-1 | Mbandaka | 6,7,14:z10:e,n,z15 | 3 | 400 | ||||||
| E-1 | Lexington | 3,10,[15][15,25]:z10:1,5 | 2 | 400 | ||||||
| H | Nessa | 1,6,14,25:z10:1,2 | 1 | 400 | ||||||
| B | Brandenburg | 4,[5],12:l,v:e,n,z15 | 5 | 330 | ||||||
| B | Bredeney | 1,4,12,27:l,v:1,7 | 4 | 330 | ||||||
| D-1 | Panama | 1,9,12:l,v:1,5 | 7 | 330 | ||||||
| D-1 | Kapemba | 9,12:l,v:1,7 | 1 | 330 | ||||||
| E-1 | Give | 3,10[15][15,34]:[d],l,v:1,7 | 3 | 330 | ||||||
| D-1 | London | 3,10[15]:l,v:1,6 | 2 | 330 | ||||||
| C-1 | Infantis | 6,7,14:r:1,5 | 3 | 275 | ||||||
| C-1 | Virchow | 6,7,14:r:1,2 | 5 | 275 | ||||||
| E-1 | Weltevreden | 3,10[15]:r:z6 | 1 | 275 | ||||||
| F | Rubislaw | 11:r:e,n,x | 1 | 275 | ||||||
| B | Typhimurium | 4,12:i:1,2 | 8 | 250 | ||||||
| F | Veneciana | 11:i:e,n,x | 4 | 250 | ||||||
| C-2 | Kentucky | 8,20:i:z6 | 2 | 250 | ||||||
| B | Chester | 1,4,5,12:e,h:e,n,x | 1 | 200 | ||||||
| C-1 | Braenderup | 6,7,14:e,h:e,n,z15 | 3 | 200 | ||||||
| E-1 | Anatum | 3,10[15][15,34]:e,h:1,6 | 6 | 200 | ||||||
| C-2 | Newport | 6,8,20:e,h:1,2 | 4 | 200 | ||||||
| C-2 | Kottbus | 6,8:e,h:1,5 | 1 | 200 | ||||||
| B | Abony | 1,4,[5],12,27:b:e,n,x | 1 | 150 | ||||||
| B | Wien | 1,4,12,27:b:l,w | 2 | 150 | ||||||
| B | Paratyphi B | 1,4,[5],12:b:1,2 | 1 | 150 | ||||||
| B | Paratyphi B var. Java | 1,4,[5],12:b:1,2 | 1 | 150 | ||||||
| B | Wagenia | 1,4,12,27:b:e,n,z15 | 4 | 150 | ||||||
| C-1 | Ohio | 6,7,14:b:l,w | 4 | 150 | ||||||
| E-4 | Tambacounda | 1,3,19:b:e,n,x | 1 | 150 | ||||||
| N | Urbana | 30:b:e,n,x | 1 | 150 | ||||||
| C-1 | Livingstone | 6,7,14:d:l,w | 2 | 100 | ||||||
| C-2 | Manhattan | 6,8:d:1,5 | 2 | 100 | ||||||
| C-2 | Muenchen | 6,8:d:1,2 | 3 | 100 | ||||||
| E-1 | Madjorio | 3,10:d:e,n,z15 | 1 | 100 | ||||||
| E-4 | Tilburg | 1,3,19:d:l,w | 2 | 100 | ||||||
| D-1 | Ndolo | 9,12:d:1,5 | 1 | 100 | ||||||
| G | Grumpensis | 12,23:d:1,7 | 2 | 100 | ||||||
| B | Miami | 1,9,12:a:1,5 | 1 | —b | ||||||
| B | Sendai | 1,9,12:a:1,5 | 1 | — | ||||||
| B | Arechavaleta | 4,[5],12:a:1,7 | 1 | — | ||||||
| B | Tinda | 1,4,12,27:a:e,n,z15 | 1 | — | ||||||
| B | Neumuenster | 1,4,12,27:k:1,6 | 1 | — | ||||||
| B | Kamoru | 1,4,12,27:y:z6 | 1 | — | ||||||
| B | Coeln | 1,4,[5],12:y:1,2 | 1 | — | ||||||
| C-1 | Mikawasima | 6,7,14:y:e,n,z15 | 3 | — | ||||||
| C-1 | Lille | 6,7,14:z38:− | 1 | — | ||||||
| C-1 | Thompson | 6,7,14:k:1,5 | 2 | — | ||||||
| C-1 | Choleraesuis | 6,7:c:1,5 | 1 | — | ||||||
| C-1 | Tennessee | 6,7,14:z29:[1,2,7] | 1 | — | ||||||
| C-2 | Albany | 8,20:z4,z24:− | 1 | — | ||||||
| C-2 | Tallahassee | 6,8:z4,z32:− | 1 | — | ||||||
| G | Worthington | 1,13,27:z:l,w | 2 | — | ||||||
| K | Cerro | 6,14,18:c:z4,z23:[1,5] | 1 | — | ||||||
| L | Rhone | 21:c:e,n,x | 1 | — | ||||||
| M | Nima | 28:y:1,5 | 1 | — | ||||||
| O:51 | Treforest | 1,51:z:1,6 | 1 | — |
a
N, number of strains.
b
—, no PCR products were obtained.