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. 2014 Dec 21;7:614. doi: 10.1186/s13071-014-0614-3

Table 1.

Sequences of the oligonucleotide primers used in this study

Pathogen Target gene Primers Final amplicon size (bp) References
Primer name Oligonucleotide sequences (5’-3’)
Anaplasma & Ehrlichia 16S rRNA EC9 TACCTTGTTACGACTT 1462 Kawahara et al., 2006 [10]
EC12A TGATCCTGGCTCAGAACGAACG
A. bovis 16S rRNA AB1f CTCGTAGCTTGCTATGAGAAC 551 Kawahara et al., 2006 [10]
AB1r TCTCCCGGACTCCAGTCTG
A. phagocytophilum 16S rRNA SSAP2f GCTGAATGTGGGGATAATTTAT 641 Kawahara et al., 2006 [10]
SSAP2r ATGGCTGCTTCCTTTCGGTTA
A. marginale msp4 Amargmsp4 F CTGAAGGGGGAGTAATGGG 344 Torina et al., 2012 [11]
Amargmsp4 R GGTAATAGCTGCCAGAGATTCC
A. ovis msp4 Aovismsp4 F TGAAGGGAGCGGGGTCATGGG 347 Torina et al., 2012 [11]
Aovismsp4 R GAGTAATTGCAGCCAGGGACTCT
Hemoparasite 18S rRNA Primer A AACCTGGTTGATCCTGCCAGT 1750 Medlin et al., 1988 [14]
Primer B GATCCTTCTGCAGGTTCACCTAC
Theileria 18S rRNA 989 AGTTTCTGACCTATCAG 1100 Allosop et al., 1993 [15]
990 TTGCCTTAAACTTCCTTG
T. luwenshuni 18S rRNA Tl310 GGTAGGGTATTGGCCTACTGA 340 Yin et al., 2008 [16]
Tl680 TCATCCGGATAATACAAGT
Babesia 18S rRNA Babesia F TGTCTTGAATACTT(C/G)AGCATGGAA 950 Ramos et al., 2010 [17]
Babesia R CGACTTCTCCTTTAAGTGATAAC