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. 2014 Dec 30;9(12):e115856. doi: 10.1371/journal.pone.0115856

Table 4. Numbers of residues in the helices (H1–H8), ILs, and ELs composing the different domains, i.e., D1 to D7, as determined with the GeoStaS algorithm applied to the 0.5 µs all-atom µOR MD simulation.

Domain H1 H2 H3 H4 H5 H6 H7 H8 EL1 EL2 EL3 IL1 IL2 IL3 RMSF (Å)
D1 [38] 13 9 1 6 9 1.42
D2 [74] 13 12 9 8 10 6 16 0.73
D3 [24] 5 1 12 6 0.94
D4 [54] 7 13 8 8 14 4 0.65
D5 [57] 7 6 11 16 10 7 1.15
D6 [31] 4 3 5 5 10 4 1.14
D7 [10] 10 2.57

Numbers between brackets correspond to the total number of residues gathered in a domain. The last column reports the mean Root Mean Square Fluctuation (RMSF) per residue for each domain. The RMSF values were computed over all Cα atoms of the µOR.