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. 2014 Dec 30;9(12):e116346. doi: 10.1371/journal.pone.0116346

Table 5. Multiple logistic regression using SNPs selected in lasso regression.

Gene SNP SNPs in high LD* Minor Allele MAF Odds Ratio Empirical P-value rank in univariate GWAS
rs544201 T 0,13 0.33 (0.26–0.56) 4,19E-05 1
CTNNA2 rs1484464 G 0,30 1.69 (1.46–2.26) 4,24E-04 2
TNFRSF1A rs4149570 rs2228576 A 0,21 1.77 (1.53–2.41) 2,58E-04 3
rs10754855 A 0,26 0.58 (0.49–0.81) 1,35E-03 6
ARHGAP26 rs17287593 G 0,01 4.55 (2.99–10.67) 5,04E-04 47
IFT46 rs2277292 rs2277295; rs17122278 A 0,05 0.23 (0.14–0.6) 2,55E-03 60

*R2>0.8 within 500 kb.