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. 2014 Nov 17;167(1):60–79. doi: 10.1104/pp.114.248450

Table I. CLD proteome.

Name/Functional Category Sequence Description Mass Sequence Length No. of Peptides Fold Change
kD
Structural
AEW43285.1 MLDP 31 282 11 4,866,667
 isotig01487.2 SOUL heme-binding protein 43 384 7 8
 isotig16296 SOUL heme-binding protein 44 393 22 87
 isotig01487.2 SOUL heme-binding protein 43 384 7 8
Membrane remodeling
 CL1Contig7649 Vesicle-inducing protein in plastids (VIPP1) 36 330 8 7
Lipid metabolism
 isotig13730 Diacylglyceryl-trimethylhomo-Ser synthesis protein 79 694 12 1,360,000
 F62NEKU02F32Z3 Cyclopropane-fatty acyl-phospholipid synthase 17 154 6 730,000
 isotig07478 Acetyl-CoA synthetase-like protein 73 662 14 1,950,000
 isotig15711 Acetyl-CoA synthetase-like protein 76 690 6 610,000
 isotig06859 Acyl carrier protein (ACP) 16 150 4 41
 CL8760Contig1 Glycerophosphodiester phosphodiesterase 42 377 5 570,000
 isotig02168.1 Acylglycerol lipase 49 450 2 200,000
Sterol biosynthesis
 isotig07413 Cycloartenol synthase 88 780 20 1,666,667
 isotig02727 Squalene epoxidase 58 532 7 520,000
 isotig06167.2 Oxysterol-binding family protein 48 426 2 625,000
 isotig14763 NAD-dependent steroid dehydrogenase 40 371 2 200,000
Carotenoid metabolism
 isotig08132.2 Retinol dehydrogenase12 41 373 5 690,000
 isotig14327 Retinol dehydrogenase14 34 309 9 1,130,000
Quinone metabolism
 CL1Contig605 NADPH:quinone reductase zinc-dependent oxidoreductase 39 364 6 590,000
Glycolysis
 isotig00097.1 Glyceraldehyde-3-phosphate dehydrogenase 42 389 9 29
Amino acid metabolism
 isotig16293 Saccharopine dehydrogenase 47 436 17 98
Catabolism
 CL2520Contig1 α/β-Hydrolase 50 436 3 455,000
 isotig03580 Amidase signature enzyme 28 250 21 2,200,000
Oxidation/reduction
 isotig10793 FAD NAD-binding oxidoreductase 26 251 8 1,305,000
 isotig16031 Short-chain dehydrogenase 41 371 8 805,000
Ca/endoplasmic reticulum (ER)
 isotig15122 EF hand 20 180 3 240,000
 isotig04172.2 Calreticulin precursor 48 429 14 55
Stress related
 CL1Contig4905.1 Hypersensitive-induced response protein 33 299 5 190,000
Nucleic acids
 F60QV6V01CU6OC RNP-1 like RNA-binding protein 20 165 3 39
 isotig01568 Endonuclease exonuclease phosphatase 42 371 6 610,000
Protein modification
 isotig14032.2 Prenyl-Cys methylesterase 53 487 13 1,400,000
Plastid
 F62NEKU02FTJB3 CP12 domain-containing protein1 17 160 4 30
 isotig09740 AIG2 family protein 47 433 8 1,055,000
 isotig17627 N-Acylethanolamine amidohydrolase 66 623 17 442
CX160991.1 Chloroplast precursor 19 180 2 65
 CL1Contig7761 Ferredoxin 16 143 2 61
 F97XPG002IZM8C Ferredoxin 13 125 2 29
Unknown
 CL6181Contig1 Hypothetical protein 23 207 4 405,000
 isotig16390 Predicted protein 26 247 4 91
 CL1Contig3525 Predicted protein 47 438 2 23
 isotig16101 Protein (DUF1350) 55 511 4 11
 CL1331Contig1 Protein (DUF500) 35 319 6 355,000