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. 2014 Dec 31;9(12):e115892. doi: 10.1371/journal.pone.0115892

Table 8. mycoSORT Results - Set of Features F1+F2+F3+F4.

Under-sampling(USF) Classifier Precision Recall F-measure MCC F-2
Training set with USF 0% Naive Bayes 0.355 0.727 0.477 0.431 0.600
Training set with USF 0% LMT 0.685 0.420 0.521 0.498 0.460
Training set with USF 0% LibSVM 0.867 0.087 0.158 0.257 0.110
Training set with USF 5% Naive Bayes 0.365 0.740 0.489 0.446 0.610
Training set with USF 5% LMT 0.585 0.480 0.527 0.484 0.500
Training set with USF 5% LibSVM 0.729 0.287 0.411 0.424 0.330
Training set with USF 10% Naive Bayes 0.349 0.787 0.484 0.448 0.630
Training set with USF 10% LMT 0.552 0.600 0.575 0.526 0.590
Training set with USF 10% LibSVM 0.670 0.420 0.516 0.491 0.450
Training set with USF 15% Naive Bayes 0.342 0.787 0.477 0.441 0.620
Training set with USF 15% LMT 0.478 0.647 0.550 0.498 0.600
Training set with USF 15% LibSVM 0.607 0.473 0.532 0.491 0.490
Training set with USF 20% Naive Bayes 0.342 0.793 0.478 0.443 0.630
Training set with USF 20% LMT 0.425 0.64 0.511 0.456 0.580
Training set with USF 20% LibSVM 0.521 0.587 0.552 0.500 0.570
Training set with USF 25% Naive Bayes 0.322 0.787 0.457 0.421 0.610
Training set with USF 25% LMT 0.389 0.747 0.511 0.469 0.630
Training set with USF 25% LibSVM 0.474 0.667 0.554 0.504 0.620
Training set with USF 30% Naive Bayes 0.336 0.773 0.469 0.430 0.610
Training set with USF 30% LMT 0.398 0.780 0.527 0.490 0.650
Training set with USF 30% LibSVM 0.459 0.673 0.546 0.496 0.620
Training set with USF 35% Naive Bayes 0.304 0.800 0.440 0.406 0.600
Training set with USF 35% LMT 0.343 0.760 0.473 0.433 0.610
Training set with USF 35% LibSVM 0.357 0.793 0.493 0.458 0.640
Training set with USF 40% Naive Bayes 0.295 0.780 0.428 0.389 0.590
Training set with USF 40% LMT 0.361 0.847 0.506 0.481 0.670
Training set with USF 40% LibSVM 0.331 0.793 0.468 0.433 0.620

Results of Positive Class on Feature Setting #4, Using Bio-entities, Content and EC Numbers as Features.