Table 3. Statistics on assemblies generated after merging multiple kmer assemblies using Trans-AByss and the non-redundant assemblies from Trinity and AByss [dedup – no redundant sequences, Mmer – multiple merged kmer assemblies].

Genotype	No. of contigs	N50	Average length (bp)
30076_ AByss _Mmer	64,014	1,154	827
30076_ AByss _Mmer_dedup	30,764	1,342	907
30076_Trinity_25mer	31,800	1,107	750
30076_Trinity_dedup	29,786	1,104	743
38901_ AByss _Mmer	70,203	1,242	891
38901_ AByss _Mmer_dedup	32,807	1,492	994
38901_Trinity_25mer	37,379	1,401	927
38901_Trinity_dedup	33,145	1,410	918
OLin_ AByss _Mmer	244,372	1,203	880
OLin_ AByss _Mmer_dedup	70,958	1,278	809
OLin_Trinity_25mer	67,098	1,641	1,112
OLin_Trinity_dedup	51,511	1,660	1,099