TABLE 1.
Oligonucleotides used in InsP3R3–3′-UTR constructs and in the mutagenesis of miR-506 binding sites
Oligo name | Sequence 5′ → 3′ |
---|---|
InsP3R3–3′-UTR Fa | ATGCTCATCACTGGAGACTGCG |
InsP3R3–3′-UTR | AGGGGCTCTTGTTCCTGTCTTCTG |
3′-UTR PWF | CGCGTCACTGGGACTCAGTTTACCTTAAT |
GCCTTAGCAGAAGATAAATCCTAAGA | |
3′-UTR PWR | AGCTTTTCTAGGAGGATTTATCTTCTGC |
TAAGGCATTAAGGTAAACTGAGTCCCAGTG | |
3′-UTR PMF | CGCGTCACTGGGACTCAGTTTACCTTAATG |
AAGTAGCAGAAGATAAATCCTAAGA | |
3′-UTR PMR | AGCTTTCTTAGGATTTATCTTCTGCTA[i]CTTC |
ATTAAGGTAAACTGAGTCCCAGTG | |
3′-UTR DWF | CGCGTCAAATCCTTTGGCCTGAGAACTAAT |
ATGTTAATTGCCTTAAATAAATTAATAGAAATCTAGTCCGTTAAAAA | |
3′-UTR DWR | AGCTTTTTTTAACGGACTAGATTTCTATTAA |
TTTATTTAAGGCAATTAACATATTAGTTCTCAGGCCAAAGGATTTG | |
3′-UTR DMF | CGCGTCAAATCCTTTGGCCTGAGAACTAAT |
ATGTTAATTG[i]AAGTAAATAAATTAATAGAAATCTAGTCCGTTAAAAA | |
3′-UTR DMR | AGCTTTTTTTTAACGGACTAGATTTCTATTA |
ATTTATTTA[i]CTTCAATTAACATATTAGTTCTCAGGCCAAAGGATTG |
a The following abbreviations are used: F, forward; R, reverse; PW and PM, proximal wild-type and mutant miR-506 binding site; DW and DM, distal wild-type and mutant miR-506 binding site. Mutated bases are in italics and underlined.