Table 2.
Results from the genome-wide and bootstrap analysis.
| Trait | SSC | Position (cM) | F-ratio | Estimate effect | 95% CI (cM) (start–end) | Significance level (P) | |
|---|---|---|---|---|---|---|---|
| Additive effect (±SE) | Dominance effect (±SE) | ||||||
| TBA | 8 | 105 | 6.98 | −0.03 (0.38) | −2.12 (0.56) | 0.0–133.0 | Chromosome-wide (<0.05) |
| 18 | 49 | 6.02 | −0.18 (0.46) | −2.37 (0.68) | 5.0–53.0 | Chromosome-wide (<0.05) | |
| LS | 6 | 102 | 5.65 | 1.38 (0.45) | 0.92 (0.65) | 7.0–102.0 | Chromosome-wide (<0.05) |
| 8 | 105 | 5.86 | −0.03 (0.43) | −2.18 (0.63) | 4.0–135.0 | Chromosome-wide (<0.05) | |
| 18 | 47 | 7.41 | −0.36 (0.52) | −2.95 (0.77) | 6.0–53.0 | Chromosome-wide (<0.01) | |
| PS | 8 | 124 | 7.53 | −0.03 (0.02) | −0.1 (0.03) | 2.0–136.0 | Chromosome-wide (<0.05) |
| OR | 7 | 56 | 7.45 | −1.38 (0.45) | 0.98 (0.58) | 8.0–75.0 | Chromosome-wide (<0.05) |
| 13 | 56 | 8.42 | −1.51 (0.4) | 0.84 (0.56) | 27.0–97.0 | Chromosome-wide (<0.01) | |
| 15 | 8 | 8.3 | −1.82 (0.47) | 1.06 (0.66) | 2.0–60.0 | Chromosome-wide (<0.01) | |
| 18 | 42 | 5.28 | −1.064 (0.45) | −1.59 (0.66) | 1.0–52.0 | Chromosome-wide (<0.05) | |
| TN | 5 | 52 | 10.32 | −0.63 (0.14) | 0.12 (0.22) | 17.5–69.0 | Genome-wide (<0.05) |
| 6 | 20 | 5.19 | −0.75 (0.23) | −0.33 (0.26) | 0.0–97.0 | Chromosome-wide (<0.05) | |
| 18 | 0 | 6.44 | −0.55 (0.15) | −0.17 (0.21) | 0.0–50.5 | Chromosome-wide (<0.05) | |
The table indicates the trait analysed (TBA, total born alive; LS, litter size; PS, prenatal survival; OR, ovulation rate; TN, teat number), chromosome (SSC) where a significant QTL was found, position of the QTL in cMs, F-ratio for the QTL, estimated additive and dominance effect (± standard error), confidence interval in cM and significant levels for each QTL.