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. 2015 Jan 6;5:7637. doi: 10.1038/srep07637

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The collection of the ORFs of the reconstructed draft genome was used as the database for BLASTx by the genes of all the Gordonia genomes in Group A. In Group B, the ORFs genomes used as the databases were G. terrae NBRC100016, G. polyisoprenivorans VH2, G. namibiensis NBRC108229 and G. amarae NBRC15530, respectively. The ORFs from G. terrae C-6, G. polyisoprenivorans NBRC16320, G. rubripertincta NBRC 101908 and the reconstructed draft genome were queries to perform BLASTp against the corresponding databases, respectively. Therefore, the denominators here are the total ORFs in the queries. The percentages in the pie charts are the average amino acid identities for the shared ORFs.