Table 1.

Tomato histone deacetylase proteins.

HDAC gene family	Gene namea	Loc. symbolb	Accession numberc	ORF length(bp)d	protein lengthe	Localizationf	Number of exons
RPD3/HDA1	SlHDA1	Solyc09g091440	XP_004247825	1497	498	nuc	7
	SlHDA3	Solyc06g071680	XP_004241512	1416	471	nuc	6
	SlHDA2	Solyc03g112410	XP_004236540	1350	449	per	5
	SlHDA4	Solyc11g067020	XP_004251031	1293	430	cyto	14
	SlHDA5	Solyc08g065350	XP_004245106	1044	347	C	13
	SlHDA9	Solyc03g115150	XP_004235971	1933	649	cyto	14
	SlHDA8	Solyc03g119730	XP_004235741	1833	610	nuc	17
	SlHDA7	Solyc01g009110	XP_004228472	798	265	Plas	4
	SlHDA6	Solyc06g074080	XP_004241339	1148	385	cyto	3
	SlHDA10	Solyc01g009120	XP_004228472	615	204	C	6
SIR2	SlSRT1	Solyc07g065550	XP_004244044	1419	472	nuc	14
	SlSRT2	Solyc04g009430	XP_004236824	1158	385	M	11
HD2	SlHDT2	Solyc10g085560	XP_004249622	924	307	nuc	11
	SlHDT3	Solyc11g066840	XP_004251012	954	317	nuc	7
	SlHDT1	Solyc09g009030	XP_004246566	810	269	nuc	10

^aSystematic designation given to tomato histone deacetylase.

^bAccession number of SGN (http://solgenomics.net) locus ID.

^cAccession numbers of full-length protein sequence available at NCBI (http://www.ncbi.nlm.nih.gov/).

^dLength of open reading frame (number of base pair).

^eLength of protein (number of amino acid).

^fLocalization of tomato histone deacetylase proteins supported by WoLF PSORT (http://www.genscript.com/psort/wolf_psort.html).

Nuc, nucleus; per, peroxisome; Plas, plasma membrane; cyto, cytoplasm; M, mitochondrion; C, chloroplast.