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. Author manuscript; available in PMC: 2016 Jan 1.
Published in final edited form as: Neurogastroenterol Motil. 2014 Nov 27;27(1):82–91. doi: 10.1111/nmo.12473

Table 3.

Comparison of genotype frequencies between ramosetron responders and non-responders

Allele frequencies pa for HWE Genotype Ramosetron Non-responders n=16 Ramosetron responders n=26 p values
SLC6A4 5-HTTLPR del(s)/ins(l) l=0.18, s=0.82
p=0.38
ll/ls/ss
ss (%)
0/8/8
50
0/7/19
73.1
0.13
SLC6A4 intron 2 VNTR 10rep=0.12
12rep=0.88
p =0.69
10/12 & 12/12rep 2/14 8/18 0.27
TPH1 rs4537731 −1066 T > C T=0.87, C=0.13
p =0.93
TT/TC/CC
C allele %
8/7/1
50
24/2/0
11.5
0.003
TPH1 rs7130929 −347 C > A C=0.87, A=0.13
p =0.93
CC/CA/AA
A allele %
8/7/1
50
24/2/0
11.5
0.003
TPH1 rs684302 7465 C > T C=0.42, T=0.68
p =0.34
CC/CT/TT
C allele %
2/7/7
56.2
3/10/13
50
0.69
TPH1 rs211105 12517 T > G T=0.89, G=0.11
p =0.58
TT/GT/GG
G allele %
9/6/1
43.8
25/1/0
3.8
0.003
TPH1 rs1800532 218 G>T G=0.33, T=0.67
p =0.66
GG/GT/TT
T allele %
3/6/7
56.2
13/10/3
50
0.69
TPH1 rs1799913 779 G > T G=0.32, T=0.68, p =0.90 GG/GT/TT
G allele %
2/7/7
56.2
13/10/3
50
0.69
TPH2 rs4570625 −709 G > T G=0.49 T=0.51
p =0.18
GG/GT/TT
G allele %
3/11/2
87.5
4/16/6
76.9
0.69

p Values by the chi-square test

a

Hardy-Weinberg equilibrium (HWE) of allele frequencies at individual loci was assessed by comparing the observed and expected genotype frequencies.