Table 1.
Table of Amino Acid Motif Frequency in Kinks and Randomly Selected Parts of Straight Helices
| Motif | Membrane | Soluble | ||||
|---|---|---|---|---|---|---|
| % of kink segments that contain the motif | % of straight segments that contain the motif | Enrichment Ratio | % of kink segments that contain the motif | % of straight segments that contain the motif | Enrichment Ratio | |
| [AVILMFYW]xxxP5 | 38.5 | 0.8 | 47.3 | 12.7 | 0.1 | 200.4 |
| xxxxP | 58.5 | 1.6 | 37.2 | 36.7 | 0.1 | 250.9 |
| [ST]P19,24 | 5.3 | 0.0 | 197.4 | 3.4 | 0.2 | 21.3 |
| [DR]P13 | 1.5 | 0.3 | 4.4 | 3.8 | 0.1 | 39.8 |
| xP | 60.9 | 6.4 | 9.5 | 39.0 | 1.7 | 23.4 |
| xxxP | 58.5 | 2.0 | 28.7 | 37.3 | 0.2 | 170.5 |
| [AVILMFYW]xP5 | 46.1 | 2.8 | 16.4 | 25.0 | 0.4 | 59.9 |
| GxP | 3.9 | 0.2 | 16.7 | 1.4 | 0.0 | 49.6 |
| xxP | 60.0 | 3.5 | 17.2 | 38.0 | 0.7 | 55.5 |
| P[ST]8,24 | 4.5 | 0.5 | 8.7 | 2.7 | 0.4 | 6.1 |
| Px | 55.3 | 9.6 | 5.7 | 35.7 | 4.6 | 7.8 |
| P | 61.3 | 9.9 | 6.2 | 40.1 | 4.6 | 8.8 |
| [VALT]LWx[AG]YP31 | 0.2 | 0.0 | NA | 0.0 | 0.0 | NA |
| GHPxVY[FI]31 | 0.0 | 0.0 | NA | 0.0 | 0.0 | NA |
| [ST][ST]5,30 | 10.7 | 10.9 | 1.0 | 9.7 | 8.2 | 1.2 |
| [ST]xx[ST]30 | 10.0 | 10.5 | 0.9 | 8.5 | 7.1 | 1.2 |
| [ST]xxx[ST]30 | 8.5 | 9.5 | 0.9 | 7.7 | 7.0 | 1.1 |
| GxxGxxxG19 | 1.3 | 1.0 | 1.3 | 0.0 | 0.1 | 0.2 |
| GxxxGxxG19 | 0.8 | 0.9 | 0.9 | 0.2 | 0.0 | 5.4 |
| [FYW]xxxSxxx[FYW]19 | 0.2 | 0.3 | 0.6 | 0.3 | 0.2 | 1.8 |
| LSAxF19 | 0.0 | 0.3 | 0.0 | 0.1 | 0.0 | NA |
| WLF[ST]32 | 0.4 | 0.0 | NA | 0.0 | 0.0 | NA |
| [FYW]xxx[FYW] | 22.6 | 11.7 | 1.9 | 9.6 | 6.4 | 1.5 |
| [FYW]xxx[FYW]xx[FYW] | 6.2 | 0.6 | 10.8 | 0.9 | 0.6 | 1.5 |
| [FYW]xxx[FYW]xxx[FYW] | 4.5 | 0.9 | 4.8 | 0.9 | 0.4 | 2.2 |
| [FYW]xx[FYW]xxx[FYW] | 3.6 | 1.2 | 3.0 | 1.2 | 0.4 | 2.7 |
| [RHDEK]xxx[RHDEK] | 7.9 | 8.9 | 0.9 | 49.0 | 57.7 | 0.8 |
| [ASG]xxx[ASG] | 38.0 | 47.8 | 0.8 | 26.4 | 32.4 | 0.8 |
| [STNQ]xxx[STNQ] | 19.4 | 17.5 | 1.1 | 25.5 | 25.2 | 1.0 |
| G0 or G+1 | 15.6 | 17.8 | 0.9 | 10.2 | 6.6 | 1.5 |