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. 2014 Oct 4;15(1):336. doi: 10.1186/1471-2105-15-336

Table 2.

Effects of the noise level and the total number of background edges on the performance of SITPR based on 100 simulation runs

Noise SN SP ACC F-measure MCC AUC
10% 0.913 ± 0.086 0.994 ± 0.044 0.967 ± 0.057 0.950 ± 0.057 0.928 ± 0.093 0.986 ± 0.045
20% 0.867 ± 0.143 0.933 ± 0.141 0.911 ± 0.126 0.893 ± 0.131 0.816 ± 0.253 0.924 ± 0.133
30% 0.889 ± 0.182 0.886 ± 0.174 0.887 ± 0.155 0.876 ± 0.171 0.775 ± 0.304 0.889 ± 0.158
Background edge number SN SP ACC F-measure MCC AUC
40 0.884 ± 0.067 0.920 ± 0.071 0.897 ± 0.059 0.900 ± 0.059 0.787 ± 0.120 0.940 ± 0.060
80 0.854 ± 0.108 0.854 ± 0.104 0.854 ± 0.103 0.852 ± 0.100 0.629 ± 0.192 0.893 ± 0.095
100 0.829 ± 0.112 0.770 ± 0.093 0.820 ± 0.095 0.792 ± 0.083 0.521 ± 0.152 0.811 ± 0.071