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. 2015 Jan 8;9(1):e3370. doi: 10.1371/journal.pntd.0003370

Table 5. Spoligotyping profiles of M. africanum isolates from patients of Ewe ethnicity.

Species SNP RD726 RD711 RD702 Spoligotyping profile Sub-lineagea SIT No %
Mafric L5 ND Del Undel ▪▪▪▪▪▪▪□□□□□▪▪▪▪□□□□□□□□▪▪□□□□□▪▪▪▪▪□□□▪▪▪▪ WA I 2 8.8
Mafric L5 ND Del Undel ▪▪▪▪▪▪▪□□□□□□□▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪□□□▪▪▪▪ WA I 438 5 21.7
Mafric L5 ND Del Undel ▪▪▪▪▪▪▪▪□□□□□▪▪▪▪▪▪▪▪□□□□▪▪▪▪▪▪▪▪▪▪▪□□□▪▪▪▪ WA I 331 7 30.4
Mafric L5 ND Del Undel ▪□▪▪▪▪▪▪□□□□□▪▪□▪▪▪▪▪□□▪□▪▪▪▪▪▪▪▪▪▪▪□□□▪▪▪▪ WA I Orphan 1 4.3
Mafric L5 ND Del Undel ▪□▪▪▪▪▪▪□□□□□□▪▪▪▪▪▪▪□□□□▪▪▪▪▪▪▪▪▪▪▪□□□▪▪▪▪ WA I 319 2 8.8
Mafric L5 ND Del Undel ▪▪▪▪▪▪▪▪□□□□□▪▪▪▪▪▪▪▪□□□□□▪□□□□□□□□□□□□□▪▪▪ WA I 1592 1 4.3
Mafric L6 ND Undel Del ▪▪▪▪▪▪□□□▪▪▪▪▪□▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪□▪▪▪▪ WA 2 324 2 8.8
Mafric L6 ND Undel Del ▪▪▪▪▪▪□□□▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪□▪▪▪▪ WA 2 181 1 4.3
Mafric L6 ND Undel Del ▪□▪▪▪▪□□□▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪□▪▪▪▪ WA 2 318 1 4.3
Mafric L6 ND Undel Del ▪▪▪▪▪▪▪▪▪□▪▪▪□□▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪□▪▪▪▪ WA 2 Orphan 1 4.3
a

Sub-lineage as defined by the MIRU-VNTRplus database, Undel = not deleted, Del = deleted, ND = Not done.