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. 2014 Sep 29;31(2):187–193. doi: 10.1093/bioinformatics/btu591

Fig. 3.

Fig. 3.

Transition/transversion mutation ratio for different call sets. This ratio has been observed to lie between 2.6 and 3.3 for coding regions in the human genome (DePristo et al., 2011). The Ts/Tv ratio was 3.02 for the CGES calling algorithm compared with 2.95 for GATK, 2.67 for FreeBayes, 2.57 for SAMtools and 2.12 for Atlas-SNP2