Table 2.
Marker ID | Population | MAF | Genotype frequency |
HWP (χ2) | Nucleotide diversity (π) | Test of neutrality |
||||
---|---|---|---|---|---|---|---|---|---|---|
11 | 12 | 22 | Tajima's DT | Fu and Li's D* | Fu and Li's F* | |||||
rs2277460 | LV | 0.0654 | 0.8691 | 0.1309 | – | 0.94 | 0.12265 | − 0.18389 | 0.42624 | 0.27631 |
LT | 0.0933 | 0.8133 | 0.1867 | – | 1.59 | 0.16981 | 0.06301 | 0.43609 | 0.37690 | |
TW | 0.0073 | 0.9854 | 0.0146 | – | 0.06 | 0.01449 | − 0.66360 | 0.37096 | 0.03623 | |
rs1048990 | LV | 0.0890 | 0.8272 | 0.1676 | 0.0052 | 0.21 | 0.16259 | 0.05540 | 0.42624 | 0.36631 |
LT | 0.1533 | 0.7067 | 0.2800 | 0.0133 | 0.92 | 0.26051 | 0.60431 | 0.43609 | 0.57821 | |
TW | 0.3254 | 0.4211 | 0.5068 | 0.0702 | 26.15*** | 0.43925 | 1.98494 | 0.37096 | 1.09877 | |
rs2295826 | LV | 0.1047 | 0.8115 | 0.1673 | 0.0209 | 2.16 | 0.18799 | 0.20752 | 0.42624 | 0.42353 |
LT | 0.1700 | 0.7000 | 0.2600 | 0.0400 | 0.93 | 0.28314 | 0.73936 | 0.43609 | 0.62844 | |
TW | 0.1545 | 0.7092 | 0.2726 | 0.0182 | 2.05 | 0.26140 | 0.87595 | 0.37096 | 0.65397 | |
rs2295827 | LV | 0.1047 | 0.8115 | 0.1673 | 0.0209 | 2.16 | 0.18799 | 0.20752 | 0.42624 | 0.42353 |
LT | 0.1700 | 0.7000 | 0.2600 | 0.0400 | 0.93 | 0.28314 | 0.73936 | 0.43609 | 0.62844 | |
TW | 0.1468 | 0.7065 | 0.2935 | – | 34.45*** | 0.25056 | 0.80841 | 0.37096 | 0.62677 | |
rs2348071 | LV | 0.2932 | 0.5340 | 0.3456 | 0.1204 | 5.28* | 0,41555 | 1.57068 | 0.42624 | 0.93621 |
LT | 0.2667 | 0.5400 | 0.3867 | 0.0733 | 0.02 | 0.39242 | 1.39150 | 0.43609 | 0.87098 | |
TW | 0.6541 | 0.1859 | 0.3199 | 0.4941 | 94.14*** | 0.45274 | 2.06904nd | 0.37096 | 1.13251 |
LV, LT and TW abbreviations are used to indicate Latvian, Lithuanian and Taiwanese populations respectively; MAF is given according to allele being minor in European populations. Statistical significance levels of probability correspond to: nd not determined (P = 0.05); * P < 0.05; *** P < 0.001.